Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961419

Identifier: 157961419

GI number: 157961419

Start: 1932396

End: 1932746

Strand: Direct

Name: 157961419

Synonym: Spea_1593

Alternate gene names: NA

Gene position: 1932396-1932746 (Clockwise)

Preceding gene: 157961418

Following gene: 157961420

Centisome position: 37.34

GC content: 45.87

Gene sequence:

>351_bases
ATGCGCTTTAAATTGATTCTAGTGTTTATTGATGATGCCTGTACCGATGCGATCTTAGATGCGGCTCGTAGTAAAGGCGC
TACTGGCGCCACAGTGATTAACCATGCTCGTGGTGAAGGTCTTAAGCAGCAAAAGACATTCATGGGTTTGTCGTTAGATG
TTCAGCGAGATGTAGTGTTGCTGCTGGTTGAAGAGCATCTATGCCGAACTATTTTAGAAACGGTCAGTGAAGTCGGTGAG
TTTGATCGTGACTCGGGCAAAGGCATCGCCATTCAAATTGATGTGGAGGACGCCGTCGGAGTCGCTCATCAGGTACAAAA
GCTAAGCCATGATATTGAGGATCAAATATGA

Upstream 100 bases:

>100_bases
TTTGGCCTGATAGCCTTTGCTAGTTTGTTTCCAATGATCACTGTGATGGGCTATGCCCAGTTAGTGGAATTTAAGAACAG
AACCCAAAAGGAGCGAGATA

Downstream 100 bases:

>100_bases
AGAACGAAAAGCTAGTCAGAAATCATGATGTCATGAGTCAAGATTATGCCATGATCGATGGGTTGCAAACCGTGGCTGAA
GCGATTGAACACGCGGTGAA

Product: putative nitrogen regulatory protein P-II

Products: NA

Alternate protein names: Nitrogen Regulatory Protein P-II Family Protein; Nitrogen Regulatory Protein PII

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRFKLILVFIDDACTDAILDAARSKGATGATVINHARGEGLKQQKTFMGLSLDVQRDVVLLLVEEHLCRTILETVSEVGE
FDRDSGKGIAIQIDVEDAVGVAHQVQKLSHDIEDQI

Sequences:

>Translated_116_residues
MRFKLILVFIDDACTDAILDAARSKGATGATVINHARGEGLKQQKTFMGLSLDVQRDVVLLLVEEHLCRTILETVSEVGE
FDRDSGKGIAIQIDVEDAVGVAHQVQKLSHDIEDQI
>Mature_116_residues
MRFKLILVFIDDACTDAILDAARSKGATGATVINHARGEGLKQQKTFMGLSLDVQRDVVLLLVEEHLCRTILETVSEVGE
FDRDSGKGIAIQIDVEDAVGVAHQVQKLSHDIEDQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12701; Mature: 12701

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKLILVFIDDACTDAILDAARSKGATGATVINHARGEGLKQQKTFMGLSLDVQRDVVL
CCEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCCEECCHHHHH
LLVEEHLCRTILETVSEVGEFDRDSGKGIAIQIDVEDAVGVAHQVQKLSHDIEDQI
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFKLILVFIDDACTDAILDAARSKGATGATVINHARGEGLKQQKTFMGLSLDVQRDVVL
CCEEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCCEECCHHHHH
LLVEEHLCRTILETVSEVGEFDRDSGKGIAIQIDVEDAVGVAHQVQKLSHDIEDQI
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA