| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is soj [H]
Identifier: 157961212
GI number: 157961212
Start: 1681984
End: 1682775
Strand: Direct
Name: soj [H]
Synonym: Spea_1384
Alternate gene names: 157961212
Gene position: 1681984-1682775 (Clockwise)
Preceding gene: 157961211
Following gene: 157961213
Centisome position: 32.5
GC content: 44.32
Gene sequence:
>792_bases TTGAAGATCTGGACCATAGCAAACCAAAAAGGCGGAGTGGGTAAAACAACAACAGTTGCCAGTCTTGCTGGTGCGTTTGT AAAACGTGGCCAACGAGTGTTAATGATTGATACCGATCCTCATGCATCCCTTGGCTATTACTTAGGTATAGATAGCGAGC AATTGCCTTGTTCCCTTTACGATCTATTTCTAGCTCACAAGAGCCTAACTCACGAAACTGTTCAAACCCATATTGTACCG ACGAATGTACAAGGGTTAGATCTGATGCCCTCTACCATGGCCTTGGCGACTTTAGATCGCAGCCTAGGTCACGAAGCGGG AATGGGACTTGTTTTAAAAAGAGCCCTAAAGCTCATCGAAGGACAGTACGATATTGTGCTAATAGATTGTCCTCCTGTAC TCGGTGTGTTGATGGTAAATGCACTAGCCGCAAGTGAGCACATTATTGTACCCGTTCAAACAGAGTTTCTGGCCTTAAAA GGGCTAGACCGTATGGTAAAAACTATGTTGTTGATGGGACGTTCAAAAAAAATTAATTATAGCTACACCATAGTGCCAAC CATGTTTGACAAACGTACTCGCGCGGCCTCAGCCGCTTTGTTGCAACTTAATGAAGATTATAACGAAGAGCTGTGGCAGG ACGTGATCCCTGTTGATACCAAATTTCGAGATGCAAGTTTGAGCCATTTACCCGCCTCCCATTATGCCCCAAGTAGCCGT GGCGTGAAGGCTTACAATAGATTACTAGATTATTTACTCGCGAAGGATCTATCCCATGTCAAAATCAGTTGA
Upstream 100 bases:
>100_bases TATGTAAGATTATTAGCCTAGCCCAATGATTTATCACTGAATTGATAGTAATCTGAGTTTAACTCGTATCTTATTAGCTT AATAAACCTAAGGGTATTTC
Downstream 100 bases:
>100_bases TGATGCGGTATGTGATTATTTTTCGTTGTTGCTTAATGAGCCAGTGGCAGAAGCTGTGAAAAGTGAGCCGTCACAAGATG CTCAATTATCTGAAACGTTA
Product: cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKIWTIANQKGGVGKTTTVASLAGAFVKRGQRVLMIDTDPHASLGYYLGIDSEQLPCSLYDLFLAHKSLTHETVQTHIVP TNVQGLDLMPSTMALATLDRSLGHEAGMGLVLKRALKLIEGQYDIVLIDCPPVLGVLMVNALAASEHIIVPVQTEFLALK GLDRMVKTMLLMGRSKKINYSYTIVPTMFDKRTRAASAALLQLNEDYNEELWQDVIPVDTKFRDASLSHLPASHYAPSSR GVKAYNRLLDYLLAKDLSHVKIS
Sequences:
>Translated_263_residues MKIWTIANQKGGVGKTTTVASLAGAFVKRGQRVLMIDTDPHASLGYYLGIDSEQLPCSLYDLFLAHKSLTHETVQTHIVP TNVQGLDLMPSTMALATLDRSLGHEAGMGLVLKRALKLIEGQYDIVLIDCPPVLGVLMVNALAASEHIIVPVQTEFLALK GLDRMVKTMLLMGRSKKINYSYTIVPTMFDKRTRAASAALLQLNEDYNEELWQDVIPVDTKFRDASLSHLPASHYAPSSR GVKAYNRLLDYLLAKDLSHVKIS >Mature_263_residues MKIWTIANQKGGVGKTTTVASLAGAFVKRGQRVLMIDTDPHASLGYYLGIDSEQLPCSLYDLFLAHKSLTHETVQTHIVP TNVQGLDLMPSTMALATLDRSLGHEAGMGLVLKRALKLIEGQYDIVLIDCPPVLGVLMVNALAASEHIIVPVQTEFLALK GLDRMVKTMLLMGRSKKINYSYTIVPTMFDKRTRAASAALLQLNEDYNEELWQDVIPVDTKFRDASLSHLPASHYAPSSR GVKAYNRLLDYLLAKDLSHVKIS
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29004; Mature: 29004
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWTIANQKGGVGKTTTVASLAGAFVKRGQRVLMIDTDPHASLGYYLGIDSEQLPCSLY CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCHHHH DLFLAHKSLTHETVQTHIVPTNVQGLDLMPSTMALATLDRSLGHEAGMGLVLKRALKLIE HHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC GQYDIVLIDCPPVLGVLMVNALAASEHIIVPVQTEFLALKGLDRMVKTMLLMGRSKKINY CCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCE SYTIVPTMFDKRTRAASAALLQLNEDYNEELWQDVIPVDTKFRDASLSHLPASHYAPSSR EEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCHHCCCCCC GVKAYNRLLDYLLAKDLSHVKIS CHHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure MKIWTIANQKGGVGKTTTVASLAGAFVKRGQRVLMIDTDPHASLGYYLGIDSEQLPCSLY CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCHHHH DLFLAHKSLTHETVQTHIVPTNVQGLDLMPSTMALATLDRSLGHEAGMGLVLKRALKLIE HHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC GQYDIVLIDCPPVLGVLMVNALAASEHIIVPVQTEFLALKGLDRMVKTMLLMGRSKKINY CCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCE SYTIVPTMFDKRTRAASAALLQLNEDYNEELWQDVIPVDTKFRDASLSHLPASHYAPSSR EEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCHHCCCCCC GVKAYNRLLDYLLAKDLSHVKIS CHHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]