| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961211
Identifier: 157961211
GI number: 157961211
Start: 1681157
End: 1681843
Strand: Direct
Name: 157961211
Synonym: Spea_1383
Alternate gene names: NA
Gene position: 1681157-1681843 (Clockwise)
Preceding gene: 157961210
Following gene: 157961212
Centisome position: 32.49
GC content: 43.67
Gene sequence:
>687_bases ATGGCTAAGGCAGCTTTGAAGCAGAGTGTCATTCAGCAACGGGGAGAAATCAATACGCTGGCGCTGCTGTTAATGTTTTT GCTGAGTATTGCGTCATTTACCTTCGGCTCACTCTATTTTGAATCACTGCATAAAAACAAGCTGTTAACTAACGAAGTTC AAAATCTTAAAAATAGCCAAGTATTACTCATGGTGCCAGATGAACAAGCTGAAGTGATGGCGAATTGGATGGCTGAAAAT CCGCACTTTGTGCGCTCTTTTGTCGATAACGCTAAGCAAGGTGAATCAACGATTTTACCCATAGGTCCGGGAGCGCAGCA ACAGTCCTCAAGCCAGGCTGTAAATTTAAAATCGAGTGATTTAGTCGTTGATGAGTCCAAAGCTGAAAGTGGTAGCCGAC AAGAGCCAGTTAAAGTTAACTCTCTTTTAGAGCCTGAGCAGAAAAAAGCTTCAAATAACGTCATAGCTAATGCTGAGCAA CAAGCTGTAGCATCGGAGCGGGATATAACTGCAGGGCTATCAGATAAACCAGAAGAGCGTAATACTCCTTCAAATATGAA TGCTGCTTTTAGCAGCAAACGTGTTCCTAAGCATGCTGTAACACTGACCGAGACGCCTGATGGCGTAAAGCTTATCAGTT TGCCCCATGGTGGGATCAGGGTAACAACTAGAGAGCCTGAAAAGTAA
Upstream 100 bases:
>100_bases GTGGTTTATGGCATGCCTCAAGCCGTCGCGGCTGCGGGTATTGCAACCAAATCAATTGCGTTAGAGCATATGGCTGAATC GATTTTAAAAGAGACCGTTA
Downstream 100 bases:
>100_bases TTATACTTCTAGCTCATTTGTGAACGGGTATATCATTCAGTATGTAAGATTATTAGCCTAGCCCAATGATTTATCACTGA ATTGATAGTAATCTGAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MAKAALKQSVIQQRGEINTLALLLMFLLSIASFTFGSLYFESLHKNKLLTNEVQNLKNSQVLLMVPDEQAEVMANWMAEN PHFVRSFVDNAKQGESTILPIGPGAQQQSSSQAVNLKSSDLVVDESKAESGSRQEPVKVNSLLEPEQKKASNNVIANAEQ QAVASERDITAGLSDKPEERNTPSNMNAAFSSKRVPKHAVTLTETPDGVKLISLPHGGIRVTTREPEK
Sequences:
>Translated_228_residues MAKAALKQSVIQQRGEINTLALLLMFLLSIASFTFGSLYFESLHKNKLLTNEVQNLKNSQVLLMVPDEQAEVMANWMAEN PHFVRSFVDNAKQGESTILPIGPGAQQQSSSQAVNLKSSDLVVDESKAESGSRQEPVKVNSLLEPEQKKASNNVIANAEQ QAVASERDITAGLSDKPEERNTPSNMNAAFSSKRVPKHAVTLTETPDGVKLISLPHGGIRVTTREPEK >Mature_227_residues AKAALKQSVIQQRGEINTLALLLMFLLSIASFTFGSLYFESLHKNKLLTNEVQNLKNSQVLLMVPDEQAEVMANWMAENP HFVRSFVDNAKQGESTILPIGPGAQQQSSSQAVNLKSSDLVVDESKAESGSRQEPVKVNSLLEPEQKKASNNVIANAEQQ AVASERDITAGLSDKPEERNTPSNMNAAFSSKRVPKHAVTLTETPDGVKLISLPHGGIRVTTREPEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24876; Mature: 24745
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAALKQSVIQQRGEINTLALLLMFLLSIASFTFGSLYFESLHKNKLLTNEVQNLKNSQ CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCE VLLMVPDEQAEVMANWMAENPHFVRSFVDNAKQGESTILPIGPGAQQQSSSQAVNLKSSD EEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCC LVVDESKAESGSRQEPVKVNSLLEPEQKKASNNVIANAEQQAVASERDITAGLSDKPEER EEEECCCCCCCCCCCCEEHHHHCCCHHHHHCCCEECCCHHHHHHHHCCCCCCCCCCCCCC NTPSNMNAAFSSKRVPKHAVTLTETPDGVKLISLPHGGIRVTTREPEK CCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCCCC >Mature Secondary Structure AKAALKQSVIQQRGEINTLALLLMFLLSIASFTFGSLYFESLHKNKLLTNEVQNLKNSQ CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCE VLLMVPDEQAEVMANWMAENPHFVRSFVDNAKQGESTILPIGPGAQQQSSSQAVNLKSSD EEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCC LVVDESKAESGSRQEPVKVNSLLEPEQKKASNNVIANAEQQAVASERDITAGLSDKPEER EEEECCCCCCCCCCCCEEHHHHCCCHHHHHCCCEECCCHHHHHHHHCCCCCCCCCCCCCC NTPSNMNAAFSSKRVPKHAVTLTETPDGVKLISLPHGGIRVTTREPEK CCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA