| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961213
Identifier: 157961213
GI number: 157961213
Start: 1682759
End: 1683676
Strand: Direct
Name: 157961213
Synonym: Spea_1385
Alternate gene names: NA
Gene position: 1682759-1683676 (Clockwise)
Preceding gene: 157961212
Following gene: 157961214
Centisome position: 32.52
GC content: 45.32
Gene sequence:
>918_bases ATGTCAAAATCAGTTGATGATGCGGTATGTGATTATTTTTCGTTGTTGCTTAATGAGCCAGTGGCAGAAGCTGTGAAAAG TGAGCCGTCACAAGATGCTCAATTATCTGAAACGTTAGAAGTTGATCCACGTTTTAGTCGTCAGGCTCTTGAGTTACTGT TTACACGGGCTAACCAGACGGCAAGTCAGCAAGACGCACAGACGCTTTCACGTACAGAAGCCAGCGTTGCTAGCGTACAG CAAGGCGTTGTCGATGCTATTGAACCCGTTGAAGTTAAAGTCGTTGCTCAGGCTCAGCAGCCCAAAATTCAGGTTGTAGA ACCACAAGATAAAGTCACAAGGCTATCGAGTTCGACACTCGATGCTTCAGAGGTTGATTCAGCTTCACAAGTGAGTGCTG TGGTAACAAGCGAACAGTCTGAGCAAGAGGCTTTAGTGTCGACTCAAACACTATTAGAACAGCTTGATGAGGAGTTTCAG GTACTTTTTTTCAATGTTGCAGGTTTAACGCTCGCAGTGCCTTTAGTCAGTCTTGGTGGGATCGTCAATTTAGATAAAGT TACTCGACTCATGGGGCGGCCTGAGTGGTATATGGGCGTGCAGCAATATCGTGAGGCGCAACTTAATGTCGTCAATACCT GCGCTTGGGTGATGCCAGAGAAGTATGATGAGCAGTTAGCTCAGAAAGTGAATTATCAATATGTTGTCGTACTTAAAGAT AGCGGCTGGGGCCTTGGGTGTGAGTCGTTAGTAGATACGATATCAATTAAGAAGTCTGATATTAATTGGCGCAGTCAAGC AGGCAAGCGTCCATGGTTAGCTGGTGTAGTAAAAGAGCAGATGTGCGGCATTTTAAATGTTGATGCCTTGGTTCAAATGT TGGCTTCAGGCTTAGGTTGCCAAGATGCGCTCATATAG
Upstream 100 bases:
>100_bases AGTTTGAGCCATTTACCCGCCTCCCATTATGCCCCAAGTAGCCGTGGCGTGAAGGCTTACAATAGATTACTAGATTATTT ACTCGCGAAGGATCTATCCC
Downstream 100 bases:
>100_bases CGCTCATATAGCAAAACGCTATAGCGTGCTAATAGAGCCTAGTTGGCTCAGTTCAAATCGTTAAGTTAGAAATTTGGCTT GGTCTTGGTATGTGATGTAC
Product: CheW protein
Products: NA
Alternate protein names: CheW Domain-Containing Protein; CheW-Like Protein; CheW Domain Protein; CheW-Like Domain-Containing Protein; Chemotaxis Coupling Protein; Chemotaxis-Like Protein; Flagellar Hook-Basal Body Complex Protein FliE
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSKSVDDAVCDYFSLLLNEPVAEAVKSEPSQDAQLSETLEVDPRFSRQALELLFTRANQTASQQDAQTLSRTEASVASVQ QGVVDAIEPVEVKVVAQAQQPKIQVVEPQDKVTRLSSSTLDASEVDSASQVSAVVTSEQSEQEALVSTQTLLEQLDEEFQ VLFFNVAGLTLAVPLVSLGGIVNLDKVTRLMGRPEWYMGVQQYREAQLNVVNTCAWVMPEKYDEQLAQKVNYQYVVVLKD SGWGLGCESLVDTISIKKSDINWRSQAGKRPWLAGVVKEQMCGILNVDALVQMLASGLGCQDALI
Sequences:
>Translated_305_residues MSKSVDDAVCDYFSLLLNEPVAEAVKSEPSQDAQLSETLEVDPRFSRQALELLFTRANQTASQQDAQTLSRTEASVASVQ QGVVDAIEPVEVKVVAQAQQPKIQVVEPQDKVTRLSSSTLDASEVDSASQVSAVVTSEQSEQEALVSTQTLLEQLDEEFQ VLFFNVAGLTLAVPLVSLGGIVNLDKVTRLMGRPEWYMGVQQYREAQLNVVNTCAWVMPEKYDEQLAQKVNYQYVVVLKD SGWGLGCESLVDTISIKKSDINWRSQAGKRPWLAGVVKEQMCGILNVDALVQMLASGLGCQDALI >Mature_304_residues SKSVDDAVCDYFSLLLNEPVAEAVKSEPSQDAQLSETLEVDPRFSRQALELLFTRANQTASQQDAQTLSRTEASVASVQQ GVVDAIEPVEVKVVAQAQQPKIQVVEPQDKVTRLSSSTLDASEVDSASQVSAVVTSEQSEQEALVSTQTLLEQLDEEFQV LFFNVAGLTLAVPLVSLGGIVNLDKVTRLMGRPEWYMGVQQYREAQLNVVNTCAWVMPEKYDEQLAQKVNYQYVVVLKDS GWGLGCESLVDTISIKKSDINWRSQAGKRPWLAGVVKEQMCGILNVDALVQMLASGLGCQDALI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33402; Mature: 33271
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSVDDAVCDYFSLLLNEPVAEAVKSEPSQDAQLSETLEVDPRFSRQALELLFTRANQT CCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCC ASQQDAQTLSRTEASVASVQQGVVDAIEPVEVKVVAQAQQPKIQVVEPQDKVTRLSSSTL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCHHHHHHHHCCCC DASEVDSASQVSAVVTSEQSEQEALVSTQTLLEQLDEEFQVLFFNVAGLTLAVPLVSLGG CHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IVNLDKVTRLMGRPEWYMGVQQYREAQLNVVNTCAWVMPEKYDEQLAQKVNYQYVVVLKD CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEC SGWGLGCESLVDTISIKKSDINWRSQAGKRPWLAGVVKEQMCGILNVDALVQMLASGLGC CCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC QDALI CCCCC >Mature Secondary Structure SKSVDDAVCDYFSLLLNEPVAEAVKSEPSQDAQLSETLEVDPRFSRQALELLFTRANQT CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCC ASQQDAQTLSRTEASVASVQQGVVDAIEPVEVKVVAQAQQPKIQVVEPQDKVTRLSSSTL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCHHHHHHHHCCCC DASEVDSASQVSAVVTSEQSEQEALVSTQTLLEQLDEEFQVLFFNVAGLTLAVPLVSLGG CHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IVNLDKVTRLMGRPEWYMGVQQYREAQLNVVNTCAWVMPEKYDEQLAQKVNYQYVVVLKD CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEC SGWGLGCESLVDTISIKKSDINWRSQAGKRPWLAGVVKEQMCGILNVDALVQMLASGLGC CCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC QDALI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA