| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is flgG [H]
Identifier: 157961173
GI number: 157961173
Start: 1639049
End: 1639837
Strand: Direct
Name: flgG [H]
Synonym: Spea_1345
Alternate gene names: 157961173
Gene position: 1639049-1639837 (Clockwise)
Preceding gene: 157961172
Following gene: 157961174
Centisome position: 31.68
GC content: 45.25
Gene sequence:
>789_bases ATGCATCCCGCTTTATGGATTAGTAAGACTGGTTTAGACGCTCAGCAAACTGATATTTCGGTAATTTCTAACAACGTGGC TAACGCCAGCACCGTAGGCTTTAAAAAGAGTCGTGCGGTTTTTGAAGACTTGCTTTATCAAAACGTTAATCAAGCAGGCG GTATTAGTGCGTCGAATACGAAACTGCCAAATGGTTTAAGTATTGGTTCGGGTACCAAAGTAGTCGCAACCCAAGAGATC TTTACTCAGGGTAACATGCTGACCACAGATAACTCGTTGGATCTATTGGTTGAAGGCCCTGGCTTTTTTGAAGTGCAACT TCCAGATGGTACCGCCGCTTATACCCGTAATGGTCAATTTAGTTTAGATGACACAGGGCAGATAGTAACTCCTGGCTCAG GCTATGTGGTGCAACCAGCAATCACAATCCCAGAAGATGCTACAAGCATTACCGTGTCTGCAGAAGGTGAAGTGTCAGTT AAAACACCGGGTAATGCAGAAAACCAGGTGGTGGGGCAGTTAGCAATATCGGATTTTATTAACCCGTCAGGACTCGATCC TATGGGGCAAAATTTGTATATGGAAACTGGCGCGAGCGGTACGCCAATCCAAGGTACCGCTTCGCTTGATGGCATGGGCG CCATTCGTCAAGGTGCACTCGAAACGTCAAATGTTAACGTGACCGAAGAGCTAGTTAACTTGATTGAAAGCCAGCGTATT TACGAGATGAACTCAAAGGTAATCTCGGCGGTTGACCAGATGTTGTCTTACGTTAACCAAAATCTTTAA
Upstream 100 bases:
>100_bases CTGCAGCGTCAGTTCGAGATGCAAGTGAAAATGATGAAAACAGCTGAAGAGAACGATCGCGCGTCCTCTTCCTTAATGCG CATAAGCTAGGAGAGATACT
Downstream 100 bases:
>100_bases GCATTTTTAAGAGGCTTTTTATATGAAGCGTTTGTGGGTTTTTATGCTGATGGCAGCCATATCAGGCTGTAACTCTACTA ACGGTAAGCCGATTGCTGAC
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGISASNTKLPNGLSIGSGTKVVATQEI FTQGNMLTTDNSLDLLVEGPGFFEVQLPDGTAAYTRNGQFSLDDTGQIVTPGSGYVVQPAITIPEDATSITVSAEGEVSV KTPGNAENQVVGQLAISDFINPSGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI YEMNSKVISAVDQMLSYVNQNL
Sequences:
>Translated_262_residues MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGISASNTKLPNGLSIGSGTKVVATQEI FTQGNMLTTDNSLDLLVEGPGFFEVQLPDGTAAYTRNGQFSLDDTGQIVTPGSGYVVQPAITIPEDATSITVSAEGEVSV KTPGNAENQVVGQLAISDFINPSGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI YEMNSKVISAVDQMLSYVNQNL >Mature_262_residues MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGISASNTKLPNGLSIGSGTKVVATQEI FTQGNMLTTDNSLDLLVEGPGFFEVQLPDGTAAYTRNGQFSLDDTGQIVTPGSGYVVQPAITIPEDATSITVSAEGEVSV KTPGNAENQVVGQLAISDFINPSGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI YEMNSKVISAVDQMLSYVNQNL
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=55.3846153846154, Blast_Score=287, Evalue=4e-79, Organism=Escherichia coli, GI1787317, Length=252, Percent_Identity=34.5238095238095, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1787316, Length=113, Percent_Identity=38.0530973451327, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27551; Mature: 27551
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGISASNT CCCCEEEEECCCCCCHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCC KLPNGLSIGSGTKVVATQEIFTQGNMLTTDNSLDLLVEGPGFFEVQLPDGTAAYTRNGQF CCCCCCCCCCCCEEEEEHHHHHCCCEEEECCCEEEEEECCCEEEEECCCCCEEEECCCEE SLDDTGQIVTPGSGYVVQPAITIPEDATSITVSAEGEVSVKTPGNAENQVVGQLAISDFI EECCCCCEEECCCCEEEECEEECCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCC NPSGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH YEMNSKVISAVDQMLSYVNQNL HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHPALWISKTGLDAQQTDISVISNNVANASTVGFKKSRAVFEDLLYQNVNQAGGISASNT CCCCEEEEECCCCCCHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCC KLPNGLSIGSGTKVVATQEIFTQGNMLTTDNSLDLLVEGPGFFEVQLPDGTAAYTRNGQF CCCCCCCCCCCCEEEEEHHHHHCCCEEEECCCEEEEEECCCEEEEECCCCCEEEECCCEE SLDDTGQIVTPGSGYVVQPAITIPEDATSITVSAEGEVSVKTPGNAENQVVGQLAISDFI EECCCCCEEECCCCEEEECEEECCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCC NPSGLDPMGQNLYMETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH YEMNSKVISAVDQMLSYVNQNL HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]