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The map label for this gene is flgH [H]

Identifier: 157961174

GI number: 157961174

Start: 1639881

End: 1640534

Strand: Direct

Name: flgH [H]

Synonym: Spea_1346

Alternate gene names: 157961174

Gene position: 1639881-1640534 (Clockwise)

Preceding gene: 157961173

Following gene: 157961175

Centisome position: 31.69

GC content: 46.94

Gene sequence:

>654_bases
ATGCTGATGGCAGCCATATCAGGCTGTAACTCTACTAACGGTAAGCCGATTGCTGACGATCCTTATTACGCGCCAGTGTA
TCCAGAGGCGCCGCCAACAAAAATCGCAGCGACAGGCTCTATGTATCAAGATAGCCAAGCATCTAGCCTCTACTCTGACA
TTAAAGCACTCAAAGTCGGTGACATCATTACAGTACTGTTGATGGAGCAGACTCAGGCGAAGAAAAGTGCTAATAACGAA
ATTTCCAAGGGAACGGATCTATCACTTGATCCGATTTATGCTGGCGGCGGCAACGTCACCATTGGCGGTAATCCAATCGA
TCTTCGCTACAAAGACAGCATGAATACTAAGCGTGAATCAGATGCTGACCAAAGCAACAGCTTGTCTGGCAGTATTTCAG
CTAACGTGATGCAGGTGCTAAATAACGGTAACTTGGTTATTCGAGGCGAAAAATGGATAAGCATCAACAACGGTGACGAG
TTTGTTCGCATCACAGGCATTGTGCGTGCCCAAGACATTCGCCCTGATAATACGATTGACTCACAGCGAGTGGCAAATGC
CCGTATTCAGTACAGTGGAACCGGTACATTTGCCGAAGTGCAAAAAGTAGGTTGGTTAGCTTCGTTCTTTATGGGTAGCT
GGTGGCCATTCTAG

Upstream 100 bases:

>100_bases
TCAAAGGTAATCTCGGCGGTTGACCAGATGTTGTCTTACGTTAACCAAAATCTTTAAGCATTTTTAAGAGGCTTTTTATA
TGAAGCGTTTGTGGGTTTTT

Downstream 100 bases:

>100_bases
GCCAACGTTATGGGTATGAGCCTAGGTTAAGGATTTAGGATGATGAAATTAAAATTGGTTTTGCTCTGTGCAATCTTAGC
CTTGAGCGCCCCTGTGCACG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLMAAISGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSDIKALKVGDIITVLLMEQTQAKKSANNE
ISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDE
FVRITGIVRAQDIRPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF

Sequences:

>Translated_217_residues
MLMAAISGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSDIKALKVGDIITVLLMEQTQAKKSANNE
ISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDE
FVRITGIVRAQDIRPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF
>Mature_217_residues
MLMAAISGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSDIKALKVGDIITVLLMEQTQAKKSANNE
ISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDSMNTKRESDADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDE
FVRITGIVRAQDIRPDNTIDSQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=220, Percent_Identity=33.6363636363636, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 23455; Mature: 23455

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMAAISGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSDIKALKVG
CEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
DIITVLLMEQTQAKKSANNEISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDSMNTKRES
HHEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEECCCEEEEEECCCCCCCCCC
DADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDEFVRITGIVRAQDIRPDNTID
CCCCCCCCCCCHHHHHHHHHCCCCEEEECCEEEEECCCCCEEEEEEEEEEECCCCCCCCC
SQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF
CHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLMAAISGCNSTNGKPIADDPYYAPVYPEAPPTKIAATGSMYQDSQASSLYSDIKALKVG
CEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
DIITVLLMEQTQAKKSANNEISKGTDLSLDPIYAGGGNVTIGGNPIDLRYKDSMNTKRES
HHEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEECCCEEEEEECCCCCCCCCC
DADQSNSLSGSISANVMQVLNNGNLVIRGEKWISINNGDEFVRITGIVRAQDIRPDNTID
CCCCCCCCCCCHHHHHHHHHCCCCEEEECCEEEEECCCCCEEEEEEEEEEECCCCCCCCC
SQRVANARIQYSGTGTFAEVQKVGWLASFFMGSWWPF
CHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA