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The map label for this gene is flgF [H]

Identifier: 157961172

GI number: 157961172

Start: 1638295

End: 1639038

Strand: Direct

Name: flgF [H]

Synonym: Spea_1344

Alternate gene names: 157961172

Gene position: 1638295-1639038 (Clockwise)

Preceding gene: 157961171

Following gene: 157961173

Centisome position: 31.66

GC content: 49.33

Gene sequence:

>744_bases
GTGGACAAATTGCTCTATGTCGCGATGAGCGGCGCTAAACAAAATATGAACTCATTGGCGGTTAGTGCTAACAATTTAGC
CAACGCTAATACCGATGGCTTTAAATCCTCCCTCGCTCAAGCTCGCTCAATGCAAGCATTTGGCGAAGGTTTGCCTACGC
GTGTGTTCTCAATGACCGAAACTCCGTCAGCTAATTTTGCCAGTGGTCCGATAAAGACCACCGGGCGCGATTTGGATATT
GCCGTAAAAGGTGATGGCTGGATTGCGGTGCAAGCCGAAAATGGCGGTGAAGCTTATACCCGCTCAGGCAGCTTGCGTTT
CGATAACTCCGGTGTGCTACGTAACGACAAAGGCACGGCAGTGATGGGTGACAATGGTCCTATTGTATTGCCGCTGCCGA
TTGAAAAGGTCGAAATTTCTCAGGACGGTATTGTCTCAGTTCGGCCCTCTGGTGCTACAGCAGAAGTTATCGAAGAGGTG
GCTCGTATTAAACTGGTCAACCCGGGTAATCAAAATTTAATGCGCGGGGAAGACGGTCTGTTCCGTTTGATGTCTGGTGA
AAATGCTCCAGCCGATCCTAGCGTGGGTCTGTTAAGTGGTGCGGTTGAAGGCAGTAACGTCAATGCAGTCCATGAGATGG
TATCTATGATTGACCTGCAGCGTCAGTTCGAGATGCAAGTGAAAATGATGAAAACAGCTGAAGAGAACGATCGCGCGTCC
TCTTCCTTAATGCGCATAAGCTAG

Upstream 100 bases:

>100_bases
GACGTAGTCACGTCCTAGCAGCGGAGCGCCCTTCCTTTTCTCTATCTTGGCACGATGTTTGCTATTTATTTCGTTAGACG
GAAGTTTGACGGAGTATCAA

Downstream 100 bases:

>100_bases
GAGAGATACTATGCATCCCGCTTTATGGATTAGTAAGACTGGTTTAGACGCTCAGCAAACTGATATTTCGGTAATTTCTA
ACAACGTGGCTAACGCCAGC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSMQAFGEGLPTRVFSMTETPSANFASGPIKTTGRDLDI
AVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDKGTAVMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEV
ARIKLVNPGNQNLMRGEDGLFRLMSGENAPADPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRAS
SSLMRIS

Sequences:

>Translated_247_residues
MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSMQAFGEGLPTRVFSMTETPSANFASGPIKTTGRDLDI
AVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDKGTAVMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEV
ARIKLVNPGNQNLMRGEDGLFRLMSGENAPADPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRAS
SSLMRIS
>Mature_247_residues
MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSMQAFGEGLPTRVFSMTETPSANFASGPIKTTGRDLDI
AVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDKGTAVMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEV
ARIKLVNPGNQNLMRGEDGLFRLMSGENAPADPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRAS
SSLMRIS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=253, Percent_Identity=40.7114624505929, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1787318, Length=254, Percent_Identity=30.3149606299213, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26212; Mature: 26212

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSMQAFGEGLPTRVFSMTE
CCCEEEEEECCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
TPSANFASGPIKTTGRDLDIAVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDKGTA
CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEEECCCCEEECCCCCEECCCCCE
VMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEVARIKLVNPGNQNLMRGEDGL
EECCCCCEEEECCCCEEEECCCCEEEECCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCE
FRLMSGENAPADPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRAS
EEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
SSLMRIS
HHEEECC
>Mature Secondary Structure
MDKLLYVAMSGAKQNMNSLAVSANNLANANTDGFKSSLAQARSMQAFGEGLPTRVFSMTE
CCCEEEEEECCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
TPSANFASGPIKTTGRDLDIAVKGDGWIAVQAENGGEAYTRSGSLRFDNSGVLRNDKGTA
CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEEECCCCEEECCCCCEECCCCCE
VMGDNGPIVLPLPIEKVEISQDGIVSVRPSGATAEVIEEVARIKLVNPGNQNLMRGEDGL
EECCCCCEEEECCCCEEEECCCCEEEECCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCE
FRLMSGENAPADPSVGLLSGAVEGSNVNAVHEMVSMIDLQRQFEMQVKMMKTAEENDRAS
EEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
SSLMRIS
HHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]