| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is flgE [H]
Identifier: 157961171
GI number: 157961171
Start: 1636277
End: 1637638
Strand: Direct
Name: flgE [H]
Synonym: Spea_1343
Alternate gene names: 157961171
Gene position: 1636277-1637638 (Clockwise)
Preceding gene: 157961170
Following gene: 157961172
Centisome position: 31.62
GC content: 47.8
Gene sequence:
>1362_bases ATGTCATTTAACATTGCATTGAGCGGTATATCGTCTGCACAAAAAGACCTAAATACAACGGCAAACAACATCGCTAACGT TAACACCACAGGCTTTAAAGAATCTCGTGCTGAATTTGCTGATGTTTATGCGAGTTCTATATTTGCCAATAGTAAAACCA CTGTGGGCGGCGGCGTGGCAACCAGTCAAGTCGCTCAGCAGTTTCATCAAGGCAGCATGCAGTTTACCAATAACTCGCTC GACATGGCGATTAATGGTGGTGGCTTCTTCGTGACTTCATCTGAAGTAGGTTCGCAAGATCACTCATTTACTCGTGCAGG TGCATTTAAGTTTGACTCAAACAACTATATCGTTGATTCTGCAGGTAACTTCTTACAGACCTTCCCGGTAGATAAAGATG GAAATTCTACATCTGTAAGTTTAACTACCACTAAGCCTGTACAAATTCCAGATACCGCAGGTAGCCCGGTTAAGACAGAT CAAGTCGGTATTCAGATGAACCTCAACGCGGGTGAGTCTACATTGGATCCTGCTGCTTTCGATCCCGATGATCCTGAGAC CTTTAACAACTCAACATCGGTGACCATATACGACTCTCTCGGCGAGCCACATATTCTTACCTCTTACTTCGTACGACCAC CTAATGCAGCCCATATAGGTGAGAGTAACTGGGTAGCGTTTTATGCCGTGGACGGTAAGCCTGTTGATTTGGACCCAGCT GCTGGTGAGTATGATATCGATACCGATGGCGATGGCGCAGTTGATGGACAAGCAAGTGCTGAGAACGCGGCGGGTTGGAA AGGCGCTGCAGTTTCTTTCAATGACACTGGGGCGTATACAGGTAGTAATCCAGCCGTTATCACTACTGAAGCCCTTGGTG TTGGCGGCGCTAACGTATTAGGCCCAGGTGCAGACGGTAGCCAGACGCTAACGCTTGATTTCAATAATCCAACTCAGTAT GCATCGCCATTTGAGGTCACGGAGTTGAATCAAAATGGTACAACAGTTGGCCGTTTGACCAACGTTGAAGTCGGCGCAGA TGGTCTGATTAACGCAAGCTACAGTAACGGCTCTACGGTACCTCTAGCACGCGTTGCTTTGGTAAGCTTTGCTAACGAGC AGGGGTTGTCTCAGGCGGGTAACACCTCTTGGAAAGCCAGCTTAGATTCGGGCCCAGCACTAGCGGGTGAAGCGAACAGT GGTACCTTTGGTAGCATTCGCTCATCGGCGCTTGAGCAGTCAAACGTTGATTTGACTACCGAGTTAGTCGACTTGATCTC GGCGCAGCGTAACTTCCAGGCGAACTCAAGAACCCTAGAAGTGAATAACACGCTACAACAGACAGTGTTGCAAATTCGAT AA
Upstream 100 bases:
>100_bases GTATCTGAAACCTAAACTAGAACTCATTTTGCGAGATATTTGCGCTCAATATGAGCAGCAAACGTCTTGAAATAGAATTA AACAAGGATTGAGGTGAATC
Downstream 100 bases:
>100_bases GCGTTAAAAGCTAAGAAGGGCGGACTCCGTCCTTCTAGGTCGCTTCGCTTCTAGGACGTTCGCAGGCTCACTGCGAGGTC CTAGGAAAAGCACAATCAAA
Product: flagellar hook protein FlgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVATSQVAQQFHQGSMQFTNNSL DMAINGGGFFVTSSEVGSQDHSFTRAGAFKFDSNNYIVDSAGNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTD QVGIQMNLNAGESTLDPAAFDPDDPETFNNSTSVTIYDSLGEPHILTSYFVRPPNAAHIGESNWVAFYAVDGKPVDLDPA AGEYDIDTDGDGAVDGQASAENAAGWKGAAVSFNDTGAYTGSNPAVITTEALGVGGANVLGPGADGSQTLTLDFNNPTQY ASPFEVTELNQNGTTVGRLTNVEVGADGLINASYSNGSTVPLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANS GTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQIR
Sequences:
>Translated_453_residues MSFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVATSQVAQQFHQGSMQFTNNSL DMAINGGGFFVTSSEVGSQDHSFTRAGAFKFDSNNYIVDSAGNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTD QVGIQMNLNAGESTLDPAAFDPDDPETFNNSTSVTIYDSLGEPHILTSYFVRPPNAAHIGESNWVAFYAVDGKPVDLDPA AGEYDIDTDGDGAVDGQASAENAAGWKGAAVSFNDTGAYTGSNPAVITTEALGVGGANVLGPGADGSQTLTLDFNNPTQY ASPFEVTELNQNGTTVGRLTNVEVGADGLINASYSNGSTVPLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANS GTFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQIR >Mature_452_residues SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVATSQVAQQFHQGSMQFTNNSLD MAINGGGFFVTSSEVGSQDHSFTRAGAFKFDSNNYIVDSAGNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTDQ VGIQMNLNAGESTLDPAAFDPDDPETFNNSTSVTIYDSLGEPHILTSYFVRPPNAAHIGESNWVAFYAVDGKPVDLDPAA GEYDIDTDGDGAVDGQASAENAAGWKGAAVSFNDTGAYTGSNPAVITTEALGVGGANVLGPGADGSQTLTLDFNNPTQYA SPFEVTELNQNGTTVGRLTNVEVGADGLINASYSNGSTVPLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANSG TFGSIRSSALEQSNVDLTTELVDLISAQRNFQANSRTLEVNNTLQQTVLQIR
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787316, Length=461, Percent_Identity=32.1041214750542, Blast_Score=195, Evalue=5e-51, Organism=Escherichia coli, GI1787318, Length=169, Percent_Identity=33.1360946745562, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 47092; Mature: 46961
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVA CEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH TSQVAQQFHQGSMQFTNNSLDMAINGGGFFVTSSEVGSQDHSFTRAGAFKFDSNNYIVDS HHHHHHHHHCCCEEEECCCEEEEEECCEEEEECCCCCCCCCCEEECCCEEECCCCEEEEC AGNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTDQVGIQMNLNAGESTLDPAAF CCCEEEECCCCCCCCCCEEEEEECCCEECCCCCCCCCEECCEEEEEECCCCCCCCCCCCC DPDDPETFNNSTSVTIYDSLGEPHILTSYFVRPPNAAHIGESNWVAFYAVDGKPVDLDPA CCCCCHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCEEECCCCC AGEYDIDTDGDGAVDGQASAENAAGWKGAAVSFNDTGAYTGSNPAVITTEALGVGGANVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEE GPGADGSQTLTLDFNNPTQYASPFEVTELNQNGTTVGRLTNVEVGADGLINASYSNGSTV CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCC PLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHCCCCHHH ELVDLISAQRNFQANSRTLEVNNTLQQTVLQIR HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCC >Mature Secondary Structure SFNIALSGISSAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVA EEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH TSQVAQQFHQGSMQFTNNSLDMAINGGGFFVTSSEVGSQDHSFTRAGAFKFDSNNYIVDS HHHHHHHHHCCCEEEECCCEEEEEECCEEEEECCCCCCCCCCEEECCCEEECCCCEEEEC AGNFLQTFPVDKDGNSTSVSLTTTKPVQIPDTAGSPVKTDQVGIQMNLNAGESTLDPAAF CCCEEEECCCCCCCCCCEEEEEECCCEECCCCCCCCCEECCEEEEEECCCCCCCCCCCCC DPDDPETFNNSTSVTIYDSLGEPHILTSYFVRPPNAAHIGESNWVAFYAVDGKPVDLDPA CCCCCHHCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCEEECCCCC AGEYDIDTDGDGAVDGQASAENAAGWKGAAVSFNDTGAYTGSNPAVITTEALGVGGANVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEE GPGADGSQTLTLDFNNPTQYASPFEVTELNQNGTTVGRLTNVEVGADGLINASYSNGSTV CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCC PLARVALVSFANEQGLSQAGNTSWKASLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHCCCCHHH ELVDLISAQRNFQANSRTLEVNNTLQQTVLQIR HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]