Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961155

Identifier: 157961155

GI number: 157961155

Start: 1622099

End: 1622674

Strand: Reverse

Name: 157961155

Synonym: Spea_1327

Alternate gene names: NA

Gene position: 1622674-1622099 (Counterclockwise)

Preceding gene: 157961156

Following gene: 157961153

Centisome position: 31.36

GC content: 47.57

Gene sequence:

>576_bases
ATGAAGTCCCTCTCTACCCTACTATTAGCAACCAGTGTGCTAGCAACAAGCGTGTTAGTTTCGTCGTCACTACAGGCCAA
AGAAGTCTCGGGCGTACAACTAGATGATTCAGTGCAACTCGACGGCCAAACACTTATCCTTAATGGTGCAGGTGTGCGCA
GTAAGTTTTTTATCGATTTGTACGTTGGTAGCTTATATGTACCTACTGCTCTAGATTCAGCCCAAGCGGTAATTGATGCG
CCAAGCGCCGCCGTCCGTCTTAATATCACTTCAGGCATGATCACTGCCGATAAGATGAAAGATGCGATAACACAAGGTTT
TGATGATGCAACCGATGGCAATACAACGCCGATTGCCGCAAAAATTGAGCAGTTTATGGGGCTATTTAGCGCTGAGATTG
TTGAGGGTGACCAGTTTACCCTACTTGCAGATAAAGCGACCGGCGTAACGGCTTATAAGAATGGTCAGGCACAAGCGACA
ATCGCTGGCGAAGACTTCCGCCAAGCACTGCTTAAGATCTGGTTAGGTGAGCAGCCTGCCCAAGACAGCTTAAAAGAAGC
CATGTTAGGCGAGTAA

Upstream 100 bases:

>100_bases
TCTCCAAAACAAAAACAAGCTGCAATATTCCACCAAAGCGGCCAATTCCAGTTAGGCTCTCGCGGTTAATTACTGCGTTT
ACTATTATTTTGAGGTTTTA

Downstream 100 bases:

>100_bases
GCTTAGCCAAAAAGATGATCAAAAAAAGGAGCTATTCGCTCCTTTTTTTATGATTCTAATCACTAACAGACTTTATAGGC
CCTTAAAAACATCTCTACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Exported Protein

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKSLSTLLLATSVLATSVLVSSSLQAKEVSGVQLDDSVQLDGQTLILNGAGVRSKFFIDLYVGSLYVPTALDSAQAVIDA
PSAAVRLNITSGMITADKMKDAITQGFDDATDGNTTPIAAKIEQFMGLFSAEIVEGDQFTLLADKATGVTAYKNGQAQAT
IAGEDFRQALLKIWLGEQPAQDSLKEAMLGE

Sequences:

>Translated_191_residues
MKSLSTLLLATSVLATSVLVSSSLQAKEVSGVQLDDSVQLDGQTLILNGAGVRSKFFIDLYVGSLYVPTALDSAQAVIDA
PSAAVRLNITSGMITADKMKDAITQGFDDATDGNTTPIAAKIEQFMGLFSAEIVEGDQFTLLADKATGVTAYKNGQAQAT
IAGEDFRQALLKIWLGEQPAQDSLKEAMLGE
>Mature_191_residues
MKSLSTLLLATSVLATSVLVSSSLQAKEVSGVQLDDSVQLDGQTLILNGAGVRSKFFIDLYVGSLYVPTALDSAQAVIDA
PSAAVRLNITSGMITADKMKDAITQGFDDATDGNTTPIAAKIEQFMGLFSAEIVEGDQFTLLADKATGVTAYKNGQAQAT
IAGEDFRQALLKIWLGEQPAQDSLKEAMLGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20079; Mature: 20079

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSTLLLATSVLATSVLVSSSLQAKEVSGVQLDDSVQLDGQTLILNGAGVRSKFFIDL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCEEECCEEEEEECCCCCEEEEEEE
YVGSLYVPTALDSAQAVIDAPSAAVRLNITSGMITADKMKDAITQGFDDATDGNTTPIAA
EECCEECCCCCCCCHHEEECCCCEEEEEECCCEEEHHHHHHHHHCCCCCCCCCCCCCHHH
KIEQFMGLFSAEIVEGDQFTLLADKATGVTAYKNGQAQATIAGEDFRQALLKIWLGEQPA
HHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEECHHHHHHHHHHHHCCCCCC
QDSLKEAMLGE
HHHHHHHHCCC
>Mature Secondary Structure
MKSLSTLLLATSVLATSVLVSSSLQAKEVSGVQLDDSVQLDGQTLILNGAGVRSKFFIDL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCEEECCEEEEEECCCCCEEEEEEE
YVGSLYVPTALDSAQAVIDAPSAAVRLNITSGMITADKMKDAITQGFDDATDGNTTPIAA
EECCEECCCCCCCCHHEEECCCCEEEEEECCCEEEHHHHHHHHHCCCCCCCCCCCCCHHH
KIEQFMGLFSAEIVEGDQFTLLADKATGVTAYKNGQAQATIAGEDFRQALLKIWLGEQPA
HHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEECHHHHHHHHHHHHCCCCCC
QDSLKEAMLGE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA