| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961156
Identifier: 157961156
GI number: 157961156
Start: 1622706
End: 1623185
Strand: Reverse
Name: 157961156
Synonym: Spea_1328
Alternate gene names: NA
Gene position: 1623185-1622706 (Counterclockwise)
Preceding gene: 157961159
Following gene: 157961155
Centisome position: 31.37
GC content: 43.75
Gene sequence:
>480_bases TTGGCACATACGTATATTCCATTTGAACAGTACAAACGTAAATGGATTTTTAATCATAAAGATCTTCCGGTTAGCGATGA AGATAAAGCGTTGATCTCACCACTCGATCAAAAGTCGTCGATGGAAGTATGGAATAAATGGATTAGCAACAAGAGTAGCC GCACCGAACAGTTCACTAAAGGTGACTGGGCAGCCAAAGACAGTGCTTGGGTATTAACCGAACATTGGCAGAGTGCTTGG GACAGTGAAGAAGCCGCGCTACCTGAAGGCTTTAGCAAGCACTTTGATTGGGCAGATGACGCACCCGTTTACTTTTGCTA TGAAAAATACCAAGTGATCGAAACACGCTGGGATGTTTTTGTACGTAACTGGAAGTGCTTCCTGTTCTTCGATGATGGTC CATTGCTTATCTCTCCAAAACAAAAACAAGCTGCAATATTCCACCAAAGCGGCCAATTCCAGTTAGGCTCTCGCGGTTAA
Upstream 100 bases:
>100_bases CACTCCCCCTAGTTTTATTTCCCAAAAACAAAGCGGATCCGTATAATACCGCTCTAGTTTAATTCGCTGTAAACAACTCA AACACTCTGGAGAGCATCGC
Downstream 100 bases:
>100_bases TTACTGCGTTTACTATTATTTTGAGGTTTTAATGAAGTCCCTCTCTACCCTACTATTAGCAACCAGTGTGCTAGCAACAA GCGTGTTAGTTTCGTCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MAHTYIPFEQYKRKWIFNHKDLPVSDEDKALISPLDQKSSMEVWNKWISNKSSRTEQFTKGDWAAKDSAWVLTEHWQSAW DSEEAALPEGFSKHFDWADDAPVYFCYEKYQVIETRWDVFVRNWKCFLFFDDGPLLISPKQKQAAIFHQSGQFQLGSRG
Sequences:
>Translated_159_residues MAHTYIPFEQYKRKWIFNHKDLPVSDEDKALISPLDQKSSMEVWNKWISNKSSRTEQFTKGDWAAKDSAWVLTEHWQSAW DSEEAALPEGFSKHFDWADDAPVYFCYEKYQVIETRWDVFVRNWKCFLFFDDGPLLISPKQKQAAIFHQSGQFQLGSRG >Mature_158_residues AHTYIPFEQYKRKWIFNHKDLPVSDEDKALISPLDQKSSMEVWNKWISNKSSRTEQFTKGDWAAKDSAWVLTEHWQSAWD SEEAALPEGFSKHFDWADDAPVYFCYEKYQVIETRWDVFVRNWKCFLFFDDGPLLISPKQKQAAIFHQSGQFQLGSRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18821; Mature: 18690
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTYIPFEQYKRKWIFNHKDLPVSDEDKALISPLDQKSSMEVWNKWISNKSSRTEQFTK CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCHHCCC GDWAAKDSAWVLTEHWQSAWDSEEAALPEGFSKHFDWADDAPVYFCYEKYQVIETRWDVF CCCCCCCCEEEEHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEHHHHHHHHHHHEE VRNWKCFLFFDDGPLLISPKQKQAAIFHQSGQFQLGSRG EECEEEEEEECCCCEEECCCCHHHEEEECCCCEECCCCC >Mature Secondary Structure AHTYIPFEQYKRKWIFNHKDLPVSDEDKALISPLDQKSSMEVWNKWISNKSSRTEQFTK CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCHHCCC GDWAAKDSAWVLTEHWQSAWDSEEAALPEGFSKHFDWADDAPVYFCYEKYQVIETRWDVF CCCCCCCCEEEEHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEHHHHHHHHHHHEE VRNWKCFLFFDDGPLLISPKQKQAAIFHQSGQFQLGSRG EECEEEEEEECCCCEEECCCCHHHEEEECCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA