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The map label for this gene is 157960922

Identifier: 157960922

GI number: 157960922

Start: 1322785

End: 1323297

Strand: Reverse

Name: 157960922

Synonym: Spea_1094

Alternate gene names: NA

Gene position: 1323297-1322785 (Counterclockwise)

Preceding gene: 157960924

Following gene: 157960921

Centisome position: 25.57

GC content: 45.42

Gene sequence:

>513_bases
ATGCCCCACAAAACTACAGGTTTTACCTTAATCGAACTCATGGTTACTCTCGTCGTAGCGACCATTCTAATAGTCATAGC
CGTCCCCTCGTTCACGATTTTTTATGCCCAAGCACGTGCCGACTCAAACATAAGAAAAATTCAACAATCGATACAATTAG
CAAGAAATCATGCCGTTTCCTATGGCTCAAGAGTGACGGTTTGCCCTATCACCGCACAAGGCTGCAGCGAAAACTGGCGC
AATAATATTACCGTTTTCAGCGACTCAGGTCAGCCCAACTTAATTGACGGTAATGATCGAGTTATTTATCAAGTCGGCCC
TTTTAACACTAAGGATTATGTTGGATACAACCGTCCGGCAATCAGGTTCCTACCCGATGGGCTCGCCTCTGGTACTAATG
GAACCTTGAGTTACTGCCCGGATACAATCAATAACTCAGAATCTCGTGCCGTCATTGTTAGCCAATCGGGAAGAGTGAGG
TTCTCACAGAAAAACGACATCAGCTGCGATTAG

Upstream 100 bases:

>100_bases
AACACTTACAATAGATATCTGTAAGCTACACTTTGCTTTTACCCCCACCTCCTAATATTTACAGGATGTAAATATTAAAA
CAACTCAAGGATGAGTTAAT

Downstream 100 bases:

>100_bases
TATTTCATAGAGGCGTTTACGATACTCTAAAACTCTTACAGATTAAAAAGTCAAAAATGCCTACAAGCCAATATATTGGC
GCGTTTTTAGCCCGATTTAT

Product: type IV pilus biogenesis protein

Products: NA

Alternate protein names: Methylation Site Containing Protein; Tfp Pilus Assembly Protein FimT; Type-4 Fimbrial Pilin Related Signal Peptide Protein; Prepilin-Type Cleavage/Methylation-Like Protein; General Secretion Pathway Protein H

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MPHKTTGFTLIELMVTLVVATILIVIAVPSFTIFYAQARADSNIRKIQQSIQLARNHAVSYGSRVTVCPITAQGCSENWR
NNITVFSDSGQPNLIDGNDRVIYQVGPFNTKDYVGYNRPAIRFLPDGLASGTNGTLSYCPDTINNSESRAVIVSQSGRVR
FSQKNDISCD

Sequences:

>Translated_170_residues
MPHKTTGFTLIELMVTLVVATILIVIAVPSFTIFYAQARADSNIRKIQQSIQLARNHAVSYGSRVTVCPITAQGCSENWR
NNITVFSDSGQPNLIDGNDRVIYQVGPFNTKDYVGYNRPAIRFLPDGLASGTNGTLSYCPDTINNSESRAVIVSQSGRVR
FSQKNDISCD
>Mature_169_residues
PHKTTGFTLIELMVTLVVATILIVIAVPSFTIFYAQARADSNIRKIQQSIQLARNHAVSYGSRVTVCPITAQGCSENWRN
NITVFSDSGQPNLIDGNDRVIYQVGPFNTKDYVGYNRPAIRFLPDGLASGTNGTLSYCPDTINNSESRAVIVSQSGRVRF
SQKNDISCD

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18663; Mature: 18532

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS00409 PROKAR_NTER_METHYL ; PS50999 COX2_TM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHKTTGFTLIELMVTLVVATILIVIAVPSFTIFYAQARADSNIRKIQQSIQLARNHAVS
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
YGSRVTVCPITAQGCSENWRNNITVFSDSGQPNLIDGNDRVIYQVGPFNTKDYVGYNRPA
CCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCCE
IRFLPDGLASGTNGTLSYCPDTINNSESRAVIVSQSGRVRFSQKNDISCD
EEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCCC
>Mature Secondary Structure 
PHKTTGFTLIELMVTLVVATILIVIAVPSFTIFYAQARADSNIRKIQQSIQLARNHAVS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
YGSRVTVCPITAQGCSENWRNNITVFSDSGQPNLIDGNDRVIYQVGPFNTKDYVGYNRPA
CCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCCE
IRFLPDGLASGTNGTLSYCPDTINNSESRAVIVSQSGRVRFSQKNDISCD
EEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA