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The map label for this gene is 157960921

Identifier: 157960921

GI number: 157960921

Start: 1322086

End: 1322622

Strand: Reverse

Name: 157960921

Synonym: Spea_1093

Alternate gene names: NA

Gene position: 1322622-1322086 (Counterclockwise)

Preceding gene: 157960922

Following gene: 157960908

Centisome position: 25.56

GC content: 38.18

Gene sequence:

>537_bases
ATGAAAGACTATAAAAAAAGAATAAGCGCTTTCACTCTTGTCGAGCTAATGGTGACTTTAGCTGTCGCGACAATATTAAT
TACCGTCGCTGCGCCCTCTTTTAATTCTTTTTATGAAAACTCCCGTAGTGACTCAGCGATTAGAAATATACAGCAATCAT
TACAGTTAGCTAGAAGCCAAGCTGTAAGTTACGGTTCTACCGTTACAGTTTGCCCATTGAGAGATGGAACATGCGGAACA
GATTGGCAAAATGGTTTTAGCGTTTTTATCGATAATGGAGTACTTGGAACACTTGATAGCACAAATGGTATAGACGATAA
GGTGATCAGAGTTATAGACGGTTTTAATTCAAAGGACTTTGTTTCTTATGATGAAAAATCCGTTAGTTTTTCATCTGACG
GTCTTATAACTGGAAGTTTTACTTCTGGTGTTATTTCGTACTGCCCAACGAATAAAACCAATGTTAATTCGAAAGCAATT
GAATTAGGTCGAGCGGGGAAAAGTCGATTCTCATCAGCAGCTACAAGCTGTAGCTAA

Upstream 100 bases:

>100_bases
ACAAGCCAATATATTGGCGCGTTTTTAGCCCGATTTATCTGCTGAAAATTAGTACACTTTGTAATATACTTGCATATGTT
ATTAGGCAAAGGATATCGCC

Downstream 100 bases:

>100_bases
ACGAAAAGCAGTAATAGATTAAATTACTGCTTTAAATAAAGCGATTATCGCACCGTAAGACTATCTAGTTTTTTACCCGC
AGCCGTATTAAATGTTTCAT

Product: type IV pilus biogenesis protein

Products: NA

Alternate protein names: Methylation Site Containing Protein; Type-4 Fimbrial Pilin Related Signal Peptide Protein; Pre-Pilin Like Leader Sequence; Methylation; Type IV Pilin; Pilus Assambly Protein; Type IV Prepilin; Prokaryotic N-Terminal Methylation Motif Domain Protein; Fimbrial Pilin Related Signal Peptide Protein; Prepilin-Type Cleavage/Methylation-Like Protein; Type IV Fimbrial Fimt-Related Pilin; General Secretion Pathway Protein H; Type-4 Fimbrial Pilin Related Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKDYKKRISAFTLVELMVTLAVATILITVAAPSFNSFYENSRSDSAIRNIQQSLQLARSQAVSYGSTVTVCPLRDGTCGT
DWQNGFSVFIDNGVLGTLDSTNGIDDKVIRVIDGFNSKDFVSYDEKSVSFSSDGLITGSFTSGVISYCPTNKTNVNSKAI
ELGRAGKSRFSSAATSCS

Sequences:

>Translated_178_residues
MKDYKKRISAFTLVELMVTLAVATILITVAAPSFNSFYENSRSDSAIRNIQQSLQLARSQAVSYGSTVTVCPLRDGTCGT
DWQNGFSVFIDNGVLGTLDSTNGIDDKVIRVIDGFNSKDFVSYDEKSVSFSSDGLITGSFTSGVISYCPTNKTNVNSKAI
ELGRAGKSRFSSAATSCS
>Mature_178_residues
MKDYKKRISAFTLVELMVTLAVATILITVAAPSFNSFYENSRSDSAIRNIQQSLQLARSQAVSYGSTVTVCPLRDGTCGT
DWQNGFSVFIDNGVLGTLDSTNGIDDKVIRVIDGFNSKDFVSYDEKSVSFSSDGLITGSFTSGVISYCPTNKTNVNSKAI
ELGRAGKSRFSSAATSCS

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19093; Mature: 19093

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDYKKRISAFTLVELMVTLAVATILITVAAPSFNSFYENSRSDSAIRNIQQSLQLARSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
AVSYGSTVTVCPLRDGTCGTDWQNGFSVFIDNGVLGTLDSTNGIDDKVIRVIDGFNSKDF
HHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCCC
VSYDEKSVSFSSDGLITGSFTSGVISYCPTNKTNVNSKAIELGRAGKSRFSSAATSCS
CCCCCCCCCCCCCCEEEECHHCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKDYKKRISAFTLVELMVTLAVATILITVAAPSFNSFYENSRSDSAIRNIQQSLQLARSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
AVSYGSTVTVCPLRDGTCGTDWQNGFSVFIDNGVLGTLDSTNGIDDKVIRVIDGFNSKDF
HHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCCC
VSYDEKSVSFSSDGLITGSFTSGVISYCPTNKTNVNSKAIELGRAGKSRFSSAATSCS
CCCCCCCCCCCCCCEEEECHHCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA