| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is phoB [H]
Identifier: 157960817
GI number: 157960817
Start: 1201053
End: 1202495
Strand: Reverse
Name: phoB [H]
Synonym: Spea_0989
Alternate gene names: 157960817
Gene position: 1202495-1201053 (Counterclockwise)
Preceding gene: 157960818
Following gene: 157960816
Centisome position: 23.24
GC content: 49.0
Gene sequence:
>1443_bases ATGACTCACTTAACCTCGATGGATCGCTTCCCTGCAATCTGCTCAAGTCTAATTATCGCAAGCCTATGCAGCACAGCCTT ATGTAGCACAGTTCTGTTAAGTAAAGAGGCTGCAGCAGACACAGACGATCCCTTTGCGCCAATTATTGCCAACGAATACC TACCGAAAAATATCATCTACCTGATTGGTGACGGTATGGGGCCAGCTTATACCAGCGCCTACCGCTACTACAGCGATAAC CCGCAAACTCAAAGAGTCGAGAAGACCATTTTCGACAAATTGTTAGTCGGCATGTCGAGCACCTACCCTGATGACGATAC TTATGTCACCGACTCTGCGGCGGCGGCTACCGCGCTCGCGACCAGCTATAAGAGCTATAACGGCGCCATATCAGTAGACC ATCACGGCGGGTCTTTCCCCACACTGCTGGAGATGGCGAAAGCGCAAGGAAAAACGACAGCGGTGGTGGTAACGTCACAG ATTAACCACGCGACCCCTGCCAGCTTTTTAGCCCATAACGAAAGCCGCCGAAACTACGACCAGATTGCCGATAGCTATTT AACTAACCTTATCAACAAGCGTCCCGTTGCCGATTTGATGCTGGGCGGCGGTAGCCAATACTTCGCACGTGATGACCGAG ATCTGACCTTAGAATTTCAAGAGTATGGCTACCAGTACGTCGATAGCCTAAGCGATTTAAACAGCATCGAAAAACTGCCA GCCCTAGGCCTATTCGCCCCTAAAGGCTTACCTAGCACATTGGAGAGCCAAGACCCTCTTCACCTCACCACTATGACCCG AAAAGCCTTGGCTTTATTATCAGAGCAAGACGCCCCCTTTGTGATGATGGTAGAGGCCAGTCAAATTGACTGGTGTGGAC ACAGCAATGATATTGTGTGCGCCATGAATGAAATGCACGACTTTGCTAATACTTTGAGCCTAGTAAAGCACTATGTCGAT ACCCACCCAGACACCTTACTCATTGCAACGGCTGATCACTCAACGGGTGGCTTAACCTTAGGACGAGAAGGCACTTACCA ATGGCAAGGCCAGTTACTGCATCAAGTTCACTCGCTGCCGAGTTCCATCGCAAAACAAATTGTTGAGACACCAGAGGTCC TCAATGATTTACCTAGCTTCACTCACTTTATTCGCCCCCATATCAGCATAGATATTGAGCCCAAGAAGCTCGACTTCCTA CGCAGCCGGCTTAATAGTCGCCTGTCTCGACACGAACCCACAAGAGAGATGGCAGACATTCTTAAGCAAGCAATTGATAG GTTCACCTATACTGGATGGACTACTGGAGGTCATGATGCTATCGATGTTCCGGTTTACGCCTATGGTAAAGGTGCAGTGT ACTTTCGAGGTCATAAAGACAATACCGAAATAGCCGCCACCTTGATTCAGATGGTGCAAGACGATCGCTACAAGGTACAG TAA
Upstream 100 bases:
>100_bases CTGTACCTAAAAAATCCAACACTCAGCAGAGGCAGCGCTCACTTTGAACCTGGCCAGCCAGACAAAACACAAGTAACATT CCATTAAGGATAACTAGAAC
Downstream 100 bases:
>100_bases CACTGCTCCTCATTACACTTGGTTGTAGCAACAATAAATTTCATTTTGGAACTGTTTACTTCGTAATTTAGCAAAACATA AAGTACAGTCGACAGTTACT
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase III; APase III [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MTHLTSMDRFPAICSSLIIASLCSTALCSTVLLSKEAAADTDDPFAPIIANEYLPKNIIYLIGDGMGPAYTSAYRYYSDN PQTQRVEKTIFDKLLVGMSSTYPDDDTYVTDSAAAATALATSYKSYNGAISVDHHGGSFPTLLEMAKAQGKTTAVVVTSQ INHATPASFLAHNESRRNYDQIADSYLTNLINKRPVADLMLGGGSQYFARDDRDLTLEFQEYGYQYVDSLSDLNSIEKLP ALGLFAPKGLPSTLESQDPLHLTTMTRKALALLSEQDAPFVMMVEASQIDWCGHSNDIVCAMNEMHDFANTLSLVKHYVD THPDTLLIATADHSTGGLTLGREGTYQWQGQLLHQVHSLPSSIAKQIVETPEVLNDLPSFTHFIRPHISIDIEPKKLDFL RSRLNSRLSRHEPTREMADILKQAIDRFTYTGWTTGGHDAIDVPVYAYGKGAVYFRGHKDNTEIAATLIQMVQDDRYKVQ
Sequences:
>Translated_480_residues MTHLTSMDRFPAICSSLIIASLCSTALCSTVLLSKEAAADTDDPFAPIIANEYLPKNIIYLIGDGMGPAYTSAYRYYSDN PQTQRVEKTIFDKLLVGMSSTYPDDDTYVTDSAAAATALATSYKSYNGAISVDHHGGSFPTLLEMAKAQGKTTAVVVTSQ INHATPASFLAHNESRRNYDQIADSYLTNLINKRPVADLMLGGGSQYFARDDRDLTLEFQEYGYQYVDSLSDLNSIEKLP ALGLFAPKGLPSTLESQDPLHLTTMTRKALALLSEQDAPFVMMVEASQIDWCGHSNDIVCAMNEMHDFANTLSLVKHYVD THPDTLLIATADHSTGGLTLGREGTYQWQGQLLHQVHSLPSSIAKQIVETPEVLNDLPSFTHFIRPHISIDIEPKKLDFL RSRLNSRLSRHEPTREMADILKQAIDRFTYTGWTTGGHDAIDVPVYAYGKGAVYFRGHKDNTEIAATLIQMVQDDRYKVQ >Mature_479_residues THLTSMDRFPAICSSLIIASLCSTALCSTVLLSKEAAADTDDPFAPIIANEYLPKNIIYLIGDGMGPAYTSAYRYYSDNP QTQRVEKTIFDKLLVGMSSTYPDDDTYVTDSAAAATALATSYKSYNGAISVDHHGGSFPTLLEMAKAQGKTTAVVVTSQI NHATPASFLAHNESRRNYDQIADSYLTNLINKRPVADLMLGGGSQYFARDDRDLTLEFQEYGYQYVDSLSDLNSIEKLPA LGLFAPKGLPSTLESQDPLHLTTMTRKALALLSEQDAPFVMMVEASQIDWCGHSNDIVCAMNEMHDFANTLSLVKHYVDT HPDTLLIATADHSTGGLTLGREGTYQWQGQLLHQVHSLPSSIAKQIVETPEVLNDLPSFTHFIRPHISIDIEPKKLDFLR SRLNSRLSRHEPTREMADILKQAIDRFTYTGWTTGGHDAIDVPVYAYGKGAVYFRGHKDNTEIAATLIQMVQDDRYKVQ
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=339, Percent_Identity=27.1386430678466, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI94721246, Length=329, Percent_Identity=27.0516717325228, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI157266296, Length=329, Percent_Identity=27.0516717325228, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI294660770, Length=329, Percent_Identity=26.7477203647416, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI157266292, Length=360, Percent_Identity=27.2222222222222, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI294660772, Length=276, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI48994877, Length=336, Percent_Identity=34.5238095238095, Blast_Score=144, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6320689, Length=499, Percent_Identity=32.064128256513, Blast_Score=180, Evalue=4e-46, Organism=Drosophila melanogaster, GI21355149, Length=339, Percent_Identity=28.023598820059, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI18859923, Length=317, Percent_Identity=29.0220820189274, Blast_Score=96, Evalue=8e-20, Organism=Drosophila melanogaster, GI24651554, Length=339, Percent_Identity=30.3834808259587, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI21355981, Length=333, Percent_Identity=27.9279279279279, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI21355151, Length=335, Percent_Identity=27.4626865671642, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI85725200, Length=339, Percent_Identity=27.4336283185841, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI85815833, Length=339, Percent_Identity=27.4336283185841, Blast_Score=86, Evalue=8e-17,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 53123; Mature: 52992
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLTSMDRFPAICSSLIIASLCSTALCSTVLLSKEAAADTDDPFAPIIANEYLPKNIIY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEE LIGDGMGPAYTSAYRYYSDNPQTQRVEKTIFDKLLVGMSSTYPDDDTYVTDSAAAATALA EEECCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHH TSYKSYNGAISVDHHGGSFPTLLEMAKAQGKTTAVVVTSQINHATPASFLAHNESRRNYD HHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHCCCCCCCHH QIADSYLTNLINKRPVADLMLGGGSQYFARDDRDLTLEFQEYGYQYVDSLSDLNSIEKLP HHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHCC ALGLFAPKGLPSTLESQDPLHLTTMTRKALALLSEQDAPFVMMVEASQIDWCGHSNDIVC CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEE AMNEMHDFANTLSLVKHYVDTHPDTLLIATADHSTGGLTLGREGTYQWQGQLLHQVHSLP EHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHH SSIAKQIVETPEVLNDLPSFTHFIRPHISIDIEPKKLDFLRSRLNSRLSRHEPTREMADI HHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHH LKQAIDRFTYTGWTTGGHDAIDVPVYAYGKGAVYFRGHKDNTEIAATLIQMVQDDRYKVQ HHHHHHHHEECCCCCCCCCCEECCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure THLTSMDRFPAICSSLIIASLCSTALCSTVLLSKEAAADTDDPFAPIIANEYLPKNIIY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEE LIGDGMGPAYTSAYRYYSDNPQTQRVEKTIFDKLLVGMSSTYPDDDTYVTDSAAAATALA EEECCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHH TSYKSYNGAISVDHHGGSFPTLLEMAKAQGKTTAVVVTSQINHATPASFLAHNESRRNYD HHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHCCCCCCCHH QIADSYLTNLINKRPVADLMLGGGSQYFARDDRDLTLEFQEYGYQYVDSLSDLNSIEKLP HHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHHHHHHCC ALGLFAPKGLPSTLESQDPLHLTTMTRKALALLSEQDAPFVMMVEASQIDWCGHSNDIVC CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEE AMNEMHDFANTLSLVKHYVDTHPDTLLIATADHSTGGLTLGREGTYQWQGQLLHQVHSLP EHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHH SSIAKQIVETPEVLNDLPSFTHFIRPHISIDIEPKKLDFLRSRLNSRLSRHEPTREMADI HHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHH LKQAIDRFTYTGWTTGGHDAIDVPVYAYGKGAVYFRGHKDNTEIAATLIQMVQDDRYKVQ HHHHHHHHEECCCCCCCCCCEECCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1898729; 9202461; 9384377; 2113910; 2105301 [H]