| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yuxL [H]
Identifier: 157960818
GI number: 157960818
Start: 1202509
End: 1205031
Strand: Reverse
Name: yuxL [H]
Synonym: Spea_0990
Alternate gene names: 157960818
Gene position: 1205031-1202509 (Counterclockwise)
Preceding gene: 157960819
Following gene: 157960817
Centisome position: 23.29
GC content: 48.08
Gene sequence:
>2523_bases ATGTCTCGCAACTCGCTCTTAATGTATGCCCTGATAGCCATCTGTTACCCGCTATTTTTCAGCAATCCAGCCATGAGTAA CAGCTACCAAGTCCCCAGCCAAGCACTGCAAGATGTCGTCGAACAAACAAAAAACGTAAGCACTCGCTTATCCCAAGATA AGCAGTGGTTAGCGGTATTAACCCCAAGGAAGCATCTATCAATCGACACTCTGGCACAAGATGAGCGCAAACTCGCAGGC CTTAGAGTATTGCCAGACTTGTTGATCCCGAGTCGTGTTAAGTACACCTACTTAAGCATAGTTCTCATTGATCTAACTCA GCTAAAATCAGCCGTAAAACCAGTCACCATAACGCTCCCCCGCGACATGCAAGTTGCTAATATTAGCTTCTCACCCGATA GCCAATACTTAAGTTATATCGGCCTAACAAATCATGGCGCCGATCTGTTTATTTATGACCTAGTAAAACAGCAAAGCCGC AAACTCAATACAGACCGCCTCAATGCCATATTAGGATTGAAATATATCTGGCAAAACGACAGCAAGGGAGTGTTCACTAA CCTCGCTGTCGAGAGCATGTCGCAAACTCTGACTCAAACGGCAATCGCCCCTAACGTAAGTGAAACCTCAGGCCAGAAAG CGCCTCGCAGAACCTATCAAGACCTGCTCAAAAATCCACAGGATGAGCACGAGTTCTCAAGTTTAACCACCAGCCAACTC AGTTTTATCGCACTCAATGGCGATGTCACCCCAATTGGTGAGCCCGCGATTAATATTAGCTATAGCCTATCACCTAACGA CAAGTACCTAGTGGTAAAACGTATCGCTGCACCTTTCTCATATATGGTGAAATATTATGACTTTACCCAATCGGTAGAGC TCTTTAGCCGCACGGGAGAAAAACTGCAAACCCTTGCTCAATTAGAGAGCAGTGAATATCGTCCGCCGGGAAGTGACTCG GTGAGAAAAGGCCCGCGCATGATCCATTGGCGTAGCGATAAACCCGATACTCTCGCCTTCGTAAAGGCTCTCGATAACGG GGATAGCCGGATTAAGATCCGCTACCGAGATCAACTGCTGCAACTCAGTGCACCTTTTACTCAAAAACCAACGCCACTAA CCAAGACGCCTTGGCGCATCAACAAAGTACAATGGGGAGAGAAACAGACCGCGCTTATCACAGAGCGACAGTCCGATAAG AAGCAGATGCGGGTGAGTCTGTTAGATACCTCAGTGCAAAGTGATAAAAGCTTGTCTCTCTGGTATCAAAAGGCGATCCG CGATACTTATAACGATCCCGGTAACCTCTACCGCCAAAGCGCTAAACTAGATGGACAAAGCCTAGGTCGAGTCTACAAGC TAGATAACAACAGCCTGCTACATTACGGCCTAGGTGCATCGCCAAAGGGCTATCAGCCTTTCTTAAAGTCATCGGCACTC ACCACTAGCCAAAAGAGCCACAGCATAGACAAGCCAGTAACCCTTTGGCAGTCATCTATGCAGGAGTTAGAAAGGGTCAA ATATATCGTAAAGCTTGAGCCGTTGACGCTTATCATCAGCAGGCAGAGCGCTGATACGCCGTCGCATTTAGTCATGCTAG AAGTCCCGTCTGGAAACGAGCAAGTCCTGTACAAAAATCCCCATAAGCTAGAAGCTTATCAAGGCATGAGTCGGCAATTG GTTAATTACACACGCGATGACGGACTGCCATTATCGGGTGTACTTTACCTACCCGCTAATTACAGTTCCGAGGATGGACC GCTACCTGTACTCATGTGGGCCTATCCCCGCGAATACAAAAATGCCGAAGTTGCCAGTCAGGTTAACTATTCGCCTAATC AATATAATCAAATTAGCGCCAAAGGTCCGGTGGCATTTGCCGCTAAGGGGTATGCAATTTTTGACAAGGTTGCCATGCCC ATTGTTGGCGAAGGTAAAGATAAACCCAACGATAGCTTCCGCCATCAGTTAGTCGCCAATGCTAACGCTGCAATCGACAC CTTAGTAGAAATGGGGGTGGCCGATAGGGAACGGGTGGCGATAGGAGGCCACTCCTACGGCGCCTTTATGGTGGCAAACC TACTGGCTCATTCAGATCTTTTTGCCGCAGGTATCGCTAGAAGCGGCGCCTATAACCGCACCTTAACGCCTTTTGGCTTT CAGCATGAGAAACGTAACTTCTGGGAAGCCCCAAGCCTCTATCAGCAGATGTCGCCCTTCACCCATGCCGACAAAATTGA TGAGCCTTTACTGCTTATGCATGGCGAGATGGACTCCAACTCCGGCACCTATCCAATGCAGTCAGCAAGACTATTTAAAG CGATAAGAGGGTTGGGGGGGCAAGCTCGCCTAGTCACCTTCCCCTATGAGAGCCATAGCTATAAGGCCAAAGAGTCGATT ATGCACATGTTGTGGGAGCAAGAAGGCTGGCTAGATCTGTACCTAAAAAATCCAACACTCAGCAGAGGCAGCGCTCACTT TGAACCTGGCCAGCCAGACAAAACACAAGTAACATTCCATTAA
Upstream 100 bases:
>100_bases AGTTTTAAACTCGTATAAACCTCCCTTAATAACGAGTTCTCAAGCGCCCATCTGATGGGCGCTTATTTTTAAATAACCAC TTCTGGATCAGGAGATAAGA
Downstream 100 bases:
>100_bases GGATAACTAGAACATGACTCACTTAACCTCGATGGATCGCTTCCCTGCAATCTGCTCAAGTCTAATTATCGCAAGCCTAT GCAGCACAGCCTTATGTAGC
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 840; Mature: 839
Protein sequence:
>840_residues MSRNSLLMYALIAICYPLFFSNPAMSNSYQVPSQALQDVVEQTKNVSTRLSQDKQWLAVLTPRKHLSIDTLAQDERKLAG LRVLPDLLIPSRVKYTYLSIVLIDLTQLKSAVKPVTITLPRDMQVANISFSPDSQYLSYIGLTNHGADLFIYDLVKQQSR KLNTDRLNAILGLKYIWQNDSKGVFTNLAVESMSQTLTQTAIAPNVSETSGQKAPRRTYQDLLKNPQDEHEFSSLTTSQL SFIALNGDVTPIGEPAINISYSLSPNDKYLVVKRIAAPFSYMVKYYDFTQSVELFSRTGEKLQTLAQLESSEYRPPGSDS VRKGPRMIHWRSDKPDTLAFVKALDNGDSRIKIRYRDQLLQLSAPFTQKPTPLTKTPWRINKVQWGEKQTALITERQSDK KQMRVSLLDTSVQSDKSLSLWYQKAIRDTYNDPGNLYRQSAKLDGQSLGRVYKLDNNSLLHYGLGASPKGYQPFLKSSAL TTSQKSHSIDKPVTLWQSSMQELERVKYIVKLEPLTLIISRQSADTPSHLVMLEVPSGNEQVLYKNPHKLEAYQGMSRQL VNYTRDDGLPLSGVLYLPANYSSEDGPLPVLMWAYPREYKNAEVASQVNYSPNQYNQISAKGPVAFAAKGYAIFDKVAMP IVGEGKDKPNDSFRHQLVANANAAIDTLVEMGVADRERVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGF QHEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSARLFKAIRGLGGQARLVTFPYESHSYKAKESI MHMLWEQEGWLDLYLKNPTLSRGSAHFEPGQPDKTQVTFH
Sequences:
>Translated_840_residues MSRNSLLMYALIAICYPLFFSNPAMSNSYQVPSQALQDVVEQTKNVSTRLSQDKQWLAVLTPRKHLSIDTLAQDERKLAG LRVLPDLLIPSRVKYTYLSIVLIDLTQLKSAVKPVTITLPRDMQVANISFSPDSQYLSYIGLTNHGADLFIYDLVKQQSR KLNTDRLNAILGLKYIWQNDSKGVFTNLAVESMSQTLTQTAIAPNVSETSGQKAPRRTYQDLLKNPQDEHEFSSLTTSQL SFIALNGDVTPIGEPAINISYSLSPNDKYLVVKRIAAPFSYMVKYYDFTQSVELFSRTGEKLQTLAQLESSEYRPPGSDS VRKGPRMIHWRSDKPDTLAFVKALDNGDSRIKIRYRDQLLQLSAPFTQKPTPLTKTPWRINKVQWGEKQTALITERQSDK KQMRVSLLDTSVQSDKSLSLWYQKAIRDTYNDPGNLYRQSAKLDGQSLGRVYKLDNNSLLHYGLGASPKGYQPFLKSSAL TTSQKSHSIDKPVTLWQSSMQELERVKYIVKLEPLTLIISRQSADTPSHLVMLEVPSGNEQVLYKNPHKLEAYQGMSRQL VNYTRDDGLPLSGVLYLPANYSSEDGPLPVLMWAYPREYKNAEVASQVNYSPNQYNQISAKGPVAFAAKGYAIFDKVAMP IVGEGKDKPNDSFRHQLVANANAAIDTLVEMGVADRERVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGF QHEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSARLFKAIRGLGGQARLVTFPYESHSYKAKESI MHMLWEQEGWLDLYLKNPTLSRGSAHFEPGQPDKTQVTFH >Mature_839_residues SRNSLLMYALIAICYPLFFSNPAMSNSYQVPSQALQDVVEQTKNVSTRLSQDKQWLAVLTPRKHLSIDTLAQDERKLAGL RVLPDLLIPSRVKYTYLSIVLIDLTQLKSAVKPVTITLPRDMQVANISFSPDSQYLSYIGLTNHGADLFIYDLVKQQSRK LNTDRLNAILGLKYIWQNDSKGVFTNLAVESMSQTLTQTAIAPNVSETSGQKAPRRTYQDLLKNPQDEHEFSSLTTSQLS FIALNGDVTPIGEPAINISYSLSPNDKYLVVKRIAAPFSYMVKYYDFTQSVELFSRTGEKLQTLAQLESSEYRPPGSDSV RKGPRMIHWRSDKPDTLAFVKALDNGDSRIKIRYRDQLLQLSAPFTQKPTPLTKTPWRINKVQWGEKQTALITERQSDKK QMRVSLLDTSVQSDKSLSLWYQKAIRDTYNDPGNLYRQSAKLDGQSLGRVYKLDNNSLLHYGLGASPKGYQPFLKSSALT TSQKSHSIDKPVTLWQSSMQELERVKYIVKLEPLTLIISRQSADTPSHLVMLEVPSGNEQVLYKNPHKLEAYQGMSRQLV NYTRDDGLPLSGVLYLPANYSSEDGPLPVLMWAYPREYKNAEVASQVNYSPNQYNQISAKGPVAFAAKGYAIFDKVAMPI VGEGKDKPNDSFRHQLVANANAAIDTLVEMGVADRERVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGFQ HEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSARLFKAIRGLGGQARLVTFPYESHSYKAKESIM HMLWEQEGWLDLYLKNPTLSRGSAHFEPGQPDKTQVTFH
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 94551; Mature: 94419
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNSLLMYALIAICYPLFFSNPAMSNSYQVPSQALQDVVEQTKNVSTRLSQDKQWLAVL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE TPRKHLSIDTLAQDERKLAGLRVLPDLLIPSRVKYTYLSIVLIDLTQLKSAVKPVTITLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC RDMQVANISFSPDSQYLSYIGLTNHGADLFIYDLVKQQSRKLNTDRLNAILGLKYIWQND CCCEEEEEECCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHEEEEEEECC SKGVFTNLAVESMSQTLTQTAIAPNVSETSGQKAPRRTYQDLLKNPQDEHEFSSLTTSQL CCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCE SFIALNGDVTPIGEPAINISYSLSPNDKYLVVKRIAAPFSYMVKYYDFTQSVELFSRTGE EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCH KLQTLAQLESSEYRPPGSDSVRKGPRMIHWRSDKPDTLAFVKALDNGDSRIKIRYRDQLL HHHHHHHHHHCCCCCCCCCHHHCCCEEEEECCCCCCCEEHHHHHCCCCCEEEEEEHHHHH QLSAPFTQKPTPLTKTPWRINKVQWGEKQTALITERQSDKKQMRVSLLDTSVQSDKSLSL HHCCCCCCCCCCCCCCCCEECCEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHH WYQKAIRDTYNDPGNLYRQSAKLDGQSLGRVYKLDNNSLLHYGLGASPKGYQPFLKSSAL HHHHHHHHCCCCCHHHHHHHHCCCCHHCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHC TTSQKSHSIDKPVTLWQSSMQELERVKYIVKLEPLTLIISRQSADTPSHLVMLEVPSGNE CCCHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCEEEEEEECCCCC QVLYKNPHKLEAYQGMSRQLVNYTRDDGLPLSGVLYLPANYSSEDGPLPVLMWAYPREYK EEEECCCCHHHHHHCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC NAEVASQVNYSPNQYNQISAKGPVAFAAKGYAIFDKVAMPIVGEGKDKPNDSFRHQLVAN CCHHHHHCCCCCCCCCEECCCCCEEEEECCHHHHHHHCCCEECCCCCCCCHHHHHHHHHC ANAAIDTLVEMGVADRERVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGF CCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC QHEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSARLFKAIRGLGG CCCCCCCCCCHHHHHHCCCCCCHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC QARLVTFPYESHSYKAKESIMHMLWEQEGWLDLYLKNPTLSRGSAHFEPGQPDKTQVTFH CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure SRNSLLMYALIAICYPLFFSNPAMSNSYQVPSQALQDVVEQTKNVSTRLSQDKQWLAVL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE TPRKHLSIDTLAQDERKLAGLRVLPDLLIPSRVKYTYLSIVLIDLTQLKSAVKPVTITLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC RDMQVANISFSPDSQYLSYIGLTNHGADLFIYDLVKQQSRKLNTDRLNAILGLKYIWQND CCCEEEEEECCCCHHHEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHEEEEEEECC SKGVFTNLAVESMSQTLTQTAIAPNVSETSGQKAPRRTYQDLLKNPQDEHEFSSLTTSQL CCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCE SFIALNGDVTPIGEPAINISYSLSPNDKYLVVKRIAAPFSYMVKYYDFTQSVELFSRTGE EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCH KLQTLAQLESSEYRPPGSDSVRKGPRMIHWRSDKPDTLAFVKALDNGDSRIKIRYRDQLL HHHHHHHHHHCCCCCCCCCHHHCCCEEEEECCCCCCCEEHHHHHCCCCCEEEEEEHHHHH QLSAPFTQKPTPLTKTPWRINKVQWGEKQTALITERQSDKKQMRVSLLDTSVQSDKSLSL HHCCCCCCCCCCCCCCCCEECCEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHH WYQKAIRDTYNDPGNLYRQSAKLDGQSLGRVYKLDNNSLLHYGLGASPKGYQPFLKSSAL HHHHHHHHCCCCCHHHHHHHHCCCCHHCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHC TTSQKSHSIDKPVTLWQSSMQELERVKYIVKLEPLTLIISRQSADTPSHLVMLEVPSGNE CCCHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCEEEEEEECCCCC QVLYKNPHKLEAYQGMSRQLVNYTRDDGLPLSGVLYLPANYSSEDGPLPVLMWAYPREYK EEEECCCCHHHHHHCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC NAEVASQVNYSPNQYNQISAKGPVAFAAKGYAIFDKVAMPIVGEGKDKPNDSFRHQLVAN CCHHHHHCCCCCCCCCEECCCCCEEEEECCHHHHHHHCCCEECCCCCCCCHHHHHHHHHC ANAAIDTLVEMGVADRERVAIGGHSYGAFMVANLLAHSDLFAAGIARSGAYNRTLTPFGF CCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC QHEKRNFWEAPSLYQQMSPFTHADKIDEPLLLMHGEMDSNSGTYPMQSARLFKAIRGLGG CCCCCCCCCCHHHHHHCCCCCCHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC QARLVTFPYESHSYKAKESIMHMLWEQEGWLDLYLKNPTLSRGSAHFEPGQPDKTQVTFH CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]