| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fepA [C]
Identifier: 157960180
GI number: 157960180
Start: 399637
End: 401622
Strand: Reverse
Name: fepA [C]
Synonym: Spea_0351
Alternate gene names: 157960180
Gene position: 401622-399637 (Counterclockwise)
Preceding gene: 157960181
Following gene: 157960172
Centisome position: 7.76
GC content: 51.16
Gene sequence:
>1986_bases ATGAACAAGAAAACAATGCTGACCATTCCTGTGGTCACCTTAGGGCTGATTTCAATCCCAGCTTTCGCCGAAACTATTCA AAAAAATAACGATTCAGAGCCTGTTGAACGCATTATCGTCACCGGCGAGTTGATGAAGGATCCGACCAAGACCTATACCG ATCCTAAAAAGCCACGCCTTCCATTACCCGCCTATGATGGTGCAGGGTTCCTTAAAACCATTCCTGGTTTTAGTATCGGC CGTAAAGGCGGCGCCGGTGGCGACCCAAGTCTGCGCGGTCTAGGCGGTTCACGCCTTAGCATTGTCGACGATGGTCAGCA TGTTTATGGCACTTGCGGCGGCCGTATGGATCCACCAACCGCCTATATCTATCCTGAGGCCTATGACAACATCACCGTCA TCAAGGGCCCACAAACGGTGAAATATGGCCCGGTCGGCAGTGCTGGCACCGTGTTGTTCGAAAAAGATCGCCATAGTTTC GATGAGCCGGGATTAGATGGCCGCGCCAGTATGACGGCGGGCAGCTTTGGCCGCACCGATTACTTAGTCGAGCTAAAAGC TGGCGATGAGAAGCATTACTTCGATATGGACGTCAATCAATCATCGAGCGACCATTACAAAGATGGTGATGGTAACGAGG TGCAATCGAGCTACGACCGCTCTAACTATAACTTTGCCCTAGGCTGGACACCAAGTGAAGCAACGGTACTCGAGCTAGCT TACGGCAGCTCTTCTGGTGAGGCGGAATATGCCGATCGCGCCAATAAAGCCCGTGAGATCAACAACGAAAATCTGACCTT TCTGCTGCAACATGAATTTGATAGTGAGTGGCTAAACAGCATCGAGCTGCAGGCCTACAGCAACGAGAACGATCACATAA TGGATCAGTTCGACCAAGGCGTAAACTCGGGTACCAACGTTAGACGTGGCACCCAAGGCGGCCACCTTTGGGCTGACTTT ACCTTAGCCACTGACTGGACATTAACCGCGGGGGCTGACTACATGGATAGCACCCATGAAGGTCGCAGCATCAACCCTGC CATCGATAACGGTTTAGACGATCTGCTGAACAAACCATTTAAAGACAACATGCGTTACCAAGCCTCAGGGCTATTTTTAG AGTCCACTTACAACCTCTCAAGCGGTAAGTTAATTGCTGGTGCCCGTTATGATCATTGGAAAACCGAACTCATGGTCGGC CAAAAAGGCGAGCGCAGCGATGATCTATTCAGTGGTTACGGCCGCTACGAACTCACCTCTGGCAACAGCCAATACTATGC CGGTGTCGGCCACGCTCAGCGAATGCCAGACTATTGGGAGATCATGAAGTCTGATGTGAATAATCCAAGCCAAAAGGCAT TCGACTTAGCGCCAGAGAAGACCACTCAGCTGGATATCGGTTGGATCTATGAAGCCGATATTGCCATCTCGACTTCGCTA TTCTATGGTGAGATCCGCGACTATATCTTGATTGATGCTAATCAGGGGCCAGCGACTACAGCCTATAACATCGACGCCAC CGTCTACGGCGGCGAGATCGCGGCTACAATCCCGCTGACGGAGCATTTCTCCAGCCAAACCAGCGTTAGCTATAGTCACG GTGACAATGATACTGCAGGCACGCCACTAGGCCAGATCCCACCACTAGAGGGACGCATCACCCTAGATTACCAATATAAC CAGTGGACTGCGGGTCTACTTTGGCGCCTAGTAGCCGCTCAAGATAGAGTCGCGATTGGCGAAGGTAACATCTCAGGCCA AGATTTAGCCGAAAGCAGCGGTTTCGGCACCCTTTCTTTCAACGCGAGCTGGAAGCATAACGAAGCAGTTTTAGTCAGCT TCGGGGTAGAGAACCTGTTCGATATCACTTATGCCGAGCATATTAGCCGCTCTGGTGCCGGTAACGACATTCCTGGTAGC TCTCCTATGTTCCAAGTCAACGAACCGGGCCGCACCGCTTGGGTTAAAGTGGATTACACTTTCTAA
Upstream 100 bases:
>100_bases ACCTGTGACCCTTTGTCGCACCTTGGGACAAATTGGTTTATCGCTATCGTAAACCTCTGTAAAACAGCCCTAAAAATAAA TAACAATAGCGATAACAGTG
Downstream 100 bases:
>100_bases ATGATTAAACACCACAGCTAAAATCTATGGACCTCGAAGGACAACAAGCTCACGAAGAAAAGCTAGCCCGTGCTTTTTGT TTTCTTCGTGCCCTCTGCGC
Product: TonB-dependent copper receptor
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; NB-Dependent Receptor Protein; Outer Membrane Copper Receptor OprC; Outer Membrane Protein C; Outer Membrane Protein; Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Protein OprC; NB-Dependent Receptor Plug; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Hemin Receptor; Outer Membrane Protein OprC Complement; NB-Dependent Receptor Plug Domain Protein; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MNKKTMLTIPVVTLGLISIPAFAETIQKNNDSEPVERIIVTGELMKDPTKTYTDPKKPRLPLPAYDGAGFLKTIPGFSIG RKGGAGGDPSLRGLGGSRLSIVDDGQHVYGTCGGRMDPPTAYIYPEAYDNITVIKGPQTVKYGPVGSAGTVLFEKDRHSF DEPGLDGRASMTAGSFGRTDYLVELKAGDEKHYFDMDVNQSSSDHYKDGDGNEVQSSYDRSNYNFALGWTPSEATVLELA YGSSSGEAEYADRANKAREINNENLTFLLQHEFDSEWLNSIELQAYSNENDHIMDQFDQGVNSGTNVRRGTQGGHLWADF TLATDWTLTAGADYMDSTHEGRSINPAIDNGLDDLLNKPFKDNMRYQASGLFLESTYNLSSGKLIAGARYDHWKTELMVG QKGERSDDLFSGYGRYELTSGNSQYYAGVGHAQRMPDYWEIMKSDVNNPSQKAFDLAPEKTTQLDIGWIYEADIAISTSL FYGEIRDYILIDANQGPATTAYNIDATVYGGEIAATIPLTEHFSSQTSVSYSHGDNDTAGTPLGQIPPLEGRITLDYQYN QWTAGLLWRLVAAQDRVAIGEGNISGQDLAESSGFGTLSFNASWKHNEAVLVSFGVENLFDITYAEHISRSGAGNDIPGS SPMFQVNEPGRTAWVKVDYTF
Sequences:
>Translated_661_residues MNKKTMLTIPVVTLGLISIPAFAETIQKNNDSEPVERIIVTGELMKDPTKTYTDPKKPRLPLPAYDGAGFLKTIPGFSIG RKGGAGGDPSLRGLGGSRLSIVDDGQHVYGTCGGRMDPPTAYIYPEAYDNITVIKGPQTVKYGPVGSAGTVLFEKDRHSF DEPGLDGRASMTAGSFGRTDYLVELKAGDEKHYFDMDVNQSSSDHYKDGDGNEVQSSYDRSNYNFALGWTPSEATVLELA YGSSSGEAEYADRANKAREINNENLTFLLQHEFDSEWLNSIELQAYSNENDHIMDQFDQGVNSGTNVRRGTQGGHLWADF TLATDWTLTAGADYMDSTHEGRSINPAIDNGLDDLLNKPFKDNMRYQASGLFLESTYNLSSGKLIAGARYDHWKTELMVG QKGERSDDLFSGYGRYELTSGNSQYYAGVGHAQRMPDYWEIMKSDVNNPSQKAFDLAPEKTTQLDIGWIYEADIAISTSL FYGEIRDYILIDANQGPATTAYNIDATVYGGEIAATIPLTEHFSSQTSVSYSHGDNDTAGTPLGQIPPLEGRITLDYQYN QWTAGLLWRLVAAQDRVAIGEGNISGQDLAESSGFGTLSFNASWKHNEAVLVSFGVENLFDITYAEHISRSGAGNDIPGS SPMFQVNEPGRTAWVKVDYTF >Mature_661_residues MNKKTMLTIPVVTLGLISIPAFAETIQKNNDSEPVERIIVTGELMKDPTKTYTDPKKPRLPLPAYDGAGFLKTIPGFSIG RKGGAGGDPSLRGLGGSRLSIVDDGQHVYGTCGGRMDPPTAYIYPEAYDNITVIKGPQTVKYGPVGSAGTVLFEKDRHSF DEPGLDGRASMTAGSFGRTDYLVELKAGDEKHYFDMDVNQSSSDHYKDGDGNEVQSSYDRSNYNFALGWTPSEATVLELA YGSSSGEAEYADRANKAREINNENLTFLLQHEFDSEWLNSIELQAYSNENDHIMDQFDQGVNSGTNVRRGTQGGHLWADF TLATDWTLTAGADYMDSTHEGRSINPAIDNGLDDLLNKPFKDNMRYQASGLFLESTYNLSSGKLIAGARYDHWKTELMVG QKGERSDDLFSGYGRYELTSGNSQYYAGVGHAQRMPDYWEIMKSDVNNPSQKAFDLAPEKTTQLDIGWIYEADIAISTSL FYGEIRDYILIDANQGPATTAYNIDATVYGGEIAATIPLTEHFSSQTSVSYSHGDNDTAGTPLGQIPPLEGRITLDYQYN QWTAGLLWRLVAAQDRVAIGEGNISGQDLAESSGFGTLSFNASWKHNEAVLVSFGVENLFDITYAEHISRSGAGNDIPGS SPMFQVNEPGRTAWVKVDYTF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72505; Mature: 72505
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKTMLTIPVVTLGLISIPAFAETIQKNNDSEPVERIIVTGELMKDPTKTYTDPKKPRL CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHCCCCHHCCCCCCCCC PLPAYDGAGFLKTIPGFSIGRKGGAGGDPSLRGLGGSRLSIVDDGQHVYGTCGGRMDPPT CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCE AYIYPEAYDNITVIKGPQTVKYGPVGSAGTVLFEKDRHSFDEPGLDGRASMTAGSFGRTD EEECCCCCCCEEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCE YLVELKAGDEKHYFDMDVNQSSSDHYKDGDGNEVQSSYDRSNYNFALGWTPSEATVLELA EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEEE YGSSSGEAEYADRANKAREINNENLTFLLQHEFDSEWLNSIELQAYSNENDHIMDQFDQG ECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCEEEEEECCCCCHHHHHHHHC VNSGTNVRRGTQGGHLWADFTLATDWTLTAGADYMDSTHEGRSINPAIDNGLDDLLNKPF CCCCCCCCCCCCCCEEEEEEEEEECEEEECCCCHHCCCCCCCCCCCHHHCCHHHHHCCCC KDNMRYQASGLFLESTYNLSSGKLIAGARYDHWKTELMVGQKGERSDDLFSGYGRYELTS HHCCEEEECCEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEC GNSQYYAGVGHAQRMPDYWEIMKSDVNNPSQKAFDLAPEKTTQLDIGWIYEADIAISTSL CCCEEEEECCHHHCCCHHHHHHHHHCCCCCHHHEECCCCCCCEEEEEEEEEECEEEEEEE FYGEIRDYILIDANQGPATTAYNIDATVYGGEIAATIPLTEHFSSQTSVSYSHGDNDTAG EEECCCEEEEEECCCCCCEEEEEEEEEEECCEEEEEECHHHHCCCCCEEEECCCCCCCCC TPLGQIPPLEGRITLDYQYNQWTAGLLWRLVAAQDRVAIGEGNISGQDLAESSGFGTLSF CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCEEEEE NASWKHNEAVLVSFGVENLFDITYAEHISRSGAGNDIPGSSPMFQVNEPGRTAWVKVDYT CCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEEEC F C >Mature Secondary Structure MNKKTMLTIPVVTLGLISIPAFAETIQKNNDSEPVERIIVTGELMKDPTKTYTDPKKPRL CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHHHCCCCHHCCCCCCCCC PLPAYDGAGFLKTIPGFSIGRKGGAGGDPSLRGLGGSRLSIVDDGQHVYGTCGGRMDPPT CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCE AYIYPEAYDNITVIKGPQTVKYGPVGSAGTVLFEKDRHSFDEPGLDGRASMTAGSFGRTD EEECCCCCCCEEEEECCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCE YLVELKAGDEKHYFDMDVNQSSSDHYKDGDGNEVQSSYDRSNYNFALGWTPSEATVLELA EEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEEE YGSSSGEAEYADRANKAREINNENLTFLLQHEFDSEWLNSIELQAYSNENDHIMDQFDQG ECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCEEEEEECCCCCHHHHHHHHC VNSGTNVRRGTQGGHLWADFTLATDWTLTAGADYMDSTHEGRSINPAIDNGLDDLLNKPF CCCCCCCCCCCCCCEEEEEEEEEECEEEECCCCHHCCCCCCCCCCCHHHCCHHHHHCCCC KDNMRYQASGLFLESTYNLSSGKLIAGARYDHWKTELMVGQKGERSDDLFSGYGRYELTS HHCCEEEECCEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEC GNSQYYAGVGHAQRMPDYWEIMKSDVNNPSQKAFDLAPEKTTQLDIGWIYEADIAISTSL CCCEEEEECCHHHCCCHHHHHHHHHCCCCCHHHEECCCCCCCEEEEEEEEEECEEEEEEE FYGEIRDYILIDANQGPATTAYNIDATVYGGEIAATIPLTEHFSSQTSVSYSHGDNDTAG EEECCCEEEEEECCCCCCEEEEEEEEEEECCEEEEEECHHHHCCCCCEEEECCCCCCCCC TPLGQIPPLEGRITLDYQYNQWTAGLLWRLVAAQDRVAIGEGNISGQDLAESSGFGTLSF CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCEEEEE NASWKHNEAVLVSFGVENLFDITYAEHISRSGAGNDIPGSSPMFQVNEPGRTAWVKVDYT CCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEEEC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA