| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960165
Identifier: 157960165
GI number: 157960165
Start: 378856
End: 380070
Strand: Direct
Name: 157960165
Synonym: Spea_0336
Alternate gene names: NA
Gene position: 378856-380070 (Clockwise)
Preceding gene: 157960162
Following gene: 157960166
Centisome position: 7.32
GC content: 44.53
Gene sequence:
>1215_bases ATGAAAAAAATAGCTTTAGTTTCAACACTTGCTCTGATTTTAACTGCTTGTGGCGGTGGAAGCGACAGTTCTGACAATGG TAGTGGCGATAACGGCAACGGCGGCGGAAGCATTCCTACTGTACCTACAGCTCCAACTGCAGTTAAAGGCACTATTGATA AAGTCGATGCTGTACAGAATAAAGTGGTTGTGAACGGCTACAGCTATGACGTTGCTGGCGTAATGTACGGCGAAGTAAAA CTAAATATTAACGATCTGCAGCCAAACATGATGGTGCAAATCGGCGGCGCTCAAAAAGCAGCTGCAGTTCAAGTTCAACT TGAACCGACTATCACAGGTAAAGTGACTGCAATCGATCCAGTTGCGGGTACATTTGATGTTAACGGTATGACCTTAACCT ACAAGTTATCTGACGAAATTGGGTTAGGTGACTGGGTGATGGTGTCTTCACTACCGACTGCAGATGCAGGCTACAAAGTC TTGTCAGTGATTAAGTTTGATATTGAAACTGAATACCCAGGACTAGCAAATAGCTACGAAGTTGAAGGTCGCCTATCTAG CTTAGATGAAAGTGCAAGAAGCTTTAAACTTGGCGCAGCCTTGACGGTTGATTACTCAGGCACTGAAGCTCACAACATTG AAGGCGTGCTTGCTGATGGTCAGTGGGTTGAAGTTGAAGGTACGTTAGTGAATGACCTGTTTGTTGCGACTAGCGTTGAA GTTGAAGATTATAGCGATCTAGCTAACGACACCGAAGTTGAAGGTATTGTGACTTGGGTTGACGCGCAAAAAGCAGCATT CGAGCTTAACTACCAAGGTCGCTTCGTTGTTAATGATCAAACTAAGTTTGAAGATGGTCCAAAGTCAAAGCTGGTACAAG GTGCTTTAGTAGAAGTGACCTCTGTTAAGCAGGGCACGCAGCAAGTTGCGACTGAAGTTGAGTTCGATGACGACAACTCA ACAGGTGACGACAACGATAACGTGGGTAGCTGGAAAGAGTTTGAAGTGGAAGGCAATGTGACAGCATCTGATGCTACAGC TAAGAGCTTCGTTATTAAGGGCATTTCTAGTAGCATGACAGTTATTGTTGACGCTAACACTCAGTATGAAGACGGTATTC GTTTCGACACCTTAAACCAGCAACGTATCGAAGTCGAAGGTGTGGTGATTAATGGTCAAAACATCGCTCGTGAAATCGAA GCCGACAACGATTAA
Upstream 100 bases:
>100_bases CTTTCATAGATTAGTTTATCTTTCTTCACGATCGCTTCACGGGCCAAGTTTTAACATACGGCTAAATTTGATAATCATCT TACTAAATAAGGGTATTTAG
Downstream 100 bases:
>100_bases TTGTAAATCAATATTTCGAACTGATTGATTCTAGAATGCCTTTCTCACGAAAGGCATTTTTGTTTCTGAACGGCTGACCT TTTTAGCTAGTACAGGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MKKIALVSTLALILTACGGGSDSSDNGSGDNGNGGGSIPTVPTAPTAVKGTIDKVDAVQNKVVVNGYSYDVAGVMYGEVK LNINDLQPNMMVQIGGAQKAAAVQVQLEPTITGKVTAIDPVAGTFDVNGMTLTYKLSDEIGLGDWVMVSSLPTADAGYKV LSVIKFDIETEYPGLANSYEVEGRLSSLDESARSFKLGAALTVDYSGTEAHNIEGVLADGQWVEVEGTLVNDLFVATSVE VEDYSDLANDTEVEGIVTWVDAQKAAFELNYQGRFVVNDQTKFEDGPKSKLVQGALVEVTSVKQGTQQVATEVEFDDDNS TGDDNDNVGSWKEFEVEGNVTASDATAKSFVIKGISSSMTVIVDANTQYEDGIRFDTLNQQRIEVEGVVINGQNIAREIE ADND
Sequences:
>Translated_404_residues MKKIALVSTLALILTACGGGSDSSDNGSGDNGNGGGSIPTVPTAPTAVKGTIDKVDAVQNKVVVNGYSYDVAGVMYGEVK LNINDLQPNMMVQIGGAQKAAAVQVQLEPTITGKVTAIDPVAGTFDVNGMTLTYKLSDEIGLGDWVMVSSLPTADAGYKV LSVIKFDIETEYPGLANSYEVEGRLSSLDESARSFKLGAALTVDYSGTEAHNIEGVLADGQWVEVEGTLVNDLFVATSVE VEDYSDLANDTEVEGIVTWVDAQKAAFELNYQGRFVVNDQTKFEDGPKSKLVQGALVEVTSVKQGTQQVATEVEFDDDNS TGDDNDNVGSWKEFEVEGNVTASDATAKSFVIKGISSSMTVIVDANTQYEDGIRFDTLNQQRIEVEGVVINGQNIAREIE ADND >Mature_404_residues MKKIALVSTLALILTACGGGSDSSDNGSGDNGNGGGSIPTVPTAPTAVKGTIDKVDAVQNKVVVNGYSYDVAGVMYGEVK LNINDLQPNMMVQIGGAQKAAAVQVQLEPTITGKVTAIDPVAGTFDVNGMTLTYKLSDEIGLGDWVMVSSLPTADAGYKV LSVIKFDIETEYPGLANSYEVEGRLSSLDESARSFKLGAALTVDYSGTEAHNIEGVLADGQWVEVEGTLVNDLFVATSVE VEDYSDLANDTEVEGIVTWVDAQKAAFELNYQGRFVVNDQTKFEDGPKSKLVQGALVEVTSVKQGTQQVATEVEFDDDNS TGDDNDNVGSWKEFEVEGNVTASDATAKSFVIKGISSSMTVIVDANTQYEDGIRFDTLNQQRIEVEGVVINGQNIAREIE ADND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42860; Mature: 42860
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIALVSTLALILTACGGGSDSSDNGSGDNGNGGGSIPTVPTAPTAVKGTIDKVDAVQN CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCC KVVVNGYSYDVAGVMYGEVKLNINDLQPNMMVQIGGAQKAAAVQVQLEPTITGKVTAIDP EEEEECCCEEEEEEEEEEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEECC VAGTFDVNGMTLTYKLSDEIGLGDWVMVSSLPTADAGYKVLSVIKFDIETEYPGLANSYE CCCEEECCCEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCEE VEGRLSSLDESARSFKLGAALTVDYSGTEAHNIEGVLADGQWVEVEGTLVNDLFVATSVE ECCHHHHHHHHHHHEEECEEEEEEECCCCCCCCCEEEECCEEEEEECEEEEEEEEEEEEE VEDYSDLANDTEVEGIVTWVDAQKAAFELNYQGRFVVNDQTKFEDGPKSKLVQGALVEVT HHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCHHHHHCCCEEEEE SVKQGTQQVATEVEFDDDNSTGDDNDNVGSWKEFEVEGNVTASDATAKSFVIKGISSSMT HHHHCHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCEEEEECCCCCEE VIVDANTQYEDGIRFDTLNQQRIEVEGVVINGQNIAREIEADND EEEECCCCCCCCEEEECCCCCEEEEEEEEECCHHHEEEECCCCC >Mature Secondary Structure MKKIALVSTLALILTACGGGSDSSDNGSGDNGNGGGSIPTVPTAPTAVKGTIDKVDAVQN CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCC KVVVNGYSYDVAGVMYGEVKLNINDLQPNMMVQIGGAQKAAAVQVQLEPTITGKVTAIDP EEEEECCCEEEEEEEEEEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEECC VAGTFDVNGMTLTYKLSDEIGLGDWVMVSSLPTADAGYKVLSVIKFDIETEYPGLANSYE CCCEEECCCEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCEE VEGRLSSLDESARSFKLGAALTVDYSGTEAHNIEGVLADGQWVEVEGTLVNDLFVATSVE ECCHHHHHHHHHHHEEECEEEEEEECCCCCCCCCEEEECCEEEEEECEEEEEEEEEEEEE VEDYSDLANDTEVEGIVTWVDAQKAAFELNYQGRFVVNDQTKFEDGPKSKLVQGALVEVT HHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCHHHHHCCCEEEEE SVKQGTQQVATEVEFDDDNSTGDDNDNVGSWKEFEVEGNVTASDATAKSFVIKGISSSMT HHHHCHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCEEEEECCCCCEE VIVDANTQYEDGIRFDTLNQQRIEVEGVVINGQNIAREIEADND EEEECCCCCCCCEEEECCCCCEEEEEEEEECCHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA