| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960162
Identifier: 157960162
GI number: 157960162
Start: 374320
End: 376035
Strand: Direct
Name: 157960162
Synonym: Spea_0333
Alternate gene names: NA
Gene position: 374320-376035 (Clockwise)
Preceding gene: 157960156
Following gene: 157960165
Centisome position: 7.23
GC content: 37.53
Gene sequence:
>1716_bases ATGAAGTTAGATATTAGTTTTGACTGGTCGAAGTCACTTCCTATTGAAGGTGGAATTCAATCTAGCGAGGTTCTCCCACC AGATCGCTTGAATAGGAAGAAATACGCTGAGTTCATAGCAAAGTTTCTAGTTTCCCAAGGCTACGACTCTAAAAGCTCTG AGCGTCATAACTATGTTCTTAACTTGAATGCGGAATGGGGGGCGGGCAAGACTTATTTTCTTAAGCGATTAGCTGAGGAT TTAAAACCGCATCATCCGGTTGTATATATCGATGCGTGGAAGCAAGATTACTCTGACGACCCATTAATGACAGTTATCTC ATCCATGATTAGCCAGTTAAGAAAACAAGCTGGAAAGAATGCAGATGACAATATTTATAAAGCTCCCAGAAAGATGATGG CTTTACTAAAGGCTGCGACTCCAGCAATCGTCGGCGGTATGACTAAGAAGTTTTTAGGTATAGATCATTTAGCAATCATG GATGCTGTTGGAGATGAAGATGATATTGGTGCAACTCTTAAAGATGAAAATGGAGAGGATATTTTTGATGAAGACGGCAA GCCTATCGATATGGGCCCTGCTGCATCTCTGTTAGTTAAGCACTTAATTGATGAGCATGACGCAAAAGCTAAATCGATAG AGAACTTGAAGGTCCATGTTAAGGAGTGGGTTGAGGCAGTAATTGGGTTAGATAATGCTAAGCACAAGGATGTAAATAGG CGATTATTTCCAGCATTCATATTTGTAGATGAGCTTGATAGGTGTAGACCTAGCTATGCCGTTGAAATGCTTGAAACTAT CAAACATATTTTTGATATTCCAGGTGTAGTCTTTGTTGTTGGAACTGATACTGAGCAGCTTCAGCATGCTGTAAAAGCTA TCTATGGAGAAGGTTTTAATGCGAGAAACTATCTAGGCCGTTTTTTTGACAGCCGTTTTACTTTAAGGCAGCCGAATATT GAGAATTTGCTTGAAGTACATTGTGATGACAACAAATTATCAGGAAGCCACTTTCGAGATTTGGATATAGTGGTATGGCC GGAAAATGATTCATCTGAAATCAATATTACAAATATAGCCACTATTATTAATTGCTTTGATTTGTCCGCAAGACAGGCTA TTCAAATAGCTAATCGGACCATAGCAATGTTAGCTAATTTACCTGCGGGTAAAAAAGTTGATATCTTAATGTTGACTCTC TTGCTTTGTATCAGGGAGAAGGATGATTCAATTTATGAGGATATTTTTTCTACTCCATTTAGAAGAGCCGAAGGTGGAAC AAATGTAGATTTGCTTTCGTTTTTAATAGAATCCTATGAATTTGAAAATAAAACTATTTTGATGGATTTTGATCCCAGAG TTAAATTTCCCAAATTTAGAGCTTATTATATTAATGAGCATTCTCATGGCGTGTATAAGGCTTCTTTAACCTATTATCTT GGGCTCTTTACAACTTTTTTTGGGCATTCATATGACGGAGATATGATTACTTTTTTAGATTGTGATGATGAAGAGCCTGA ATCTAAGATAGAGAAACTTCTAGAAGAGCTACGAATTTCTAATCCATGTACTGATGGTTTTGCATTTCCAGAGGAGCCTG CAGCCAACTCTTGGTTAGGCTGTATGTATTACCATGAAGAAATGGAAAAGCTAAAACCAAAAGATTATAAAGATCTTGTA GAGTTATCATCATCACTTGACTGGCTCGATGATTAA
Upstream 100 bases:
>100_bases TTAACATCATTTGTTCATTCAAGATGTTGTTTTTGTTTGCTAAAAATATTGATGGGTAAGATACTCTCTGCTTACCTAAT CATTCAATGTAAGAGAACTT
Downstream 100 bases:
>100_bases ATTATTCAGAGGTTGGGCTAATACCTTAGGTTTTTAGGCATGACTCCTAAGGCAAGCTATTCCGCTTGTCTAACCTAGTG TAGATACGGCTGAAGCCTTC
Product: KAP P-loop domain-containing protein
Products: NA
Alternate protein names: KAP P-Loop; KAP Family P-Loop Domain Protein; P-Loop ATPase; KAP P-Loop Domain Protein; Kap P-Loop Domain Protein; KAP Family P-Loop Domain-Containing Protein; Phage T7 Exclusion Protein
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MKLDISFDWSKSLPIEGGIQSSEVLPPDRLNRKKYAEFIAKFLVSQGYDSKSSERHNYVLNLNAEWGAGKTYFLKRLAED LKPHHPVVYIDAWKQDYSDDPLMTVISSMISQLRKQAGKNADDNIYKAPRKMMALLKAATPAIVGGMTKKFLGIDHLAIM DAVGDEDDIGATLKDENGEDIFDEDGKPIDMGPAASLLVKHLIDEHDAKAKSIENLKVHVKEWVEAVIGLDNAKHKDVNR RLFPAFIFVDELDRCRPSYAVEMLETIKHIFDIPGVVFVVGTDTEQLQHAVKAIYGEGFNARNYLGRFFDSRFTLRQPNI ENLLEVHCDDNKLSGSHFRDLDIVVWPENDSSEINITNIATIINCFDLSARQAIQIANRTIAMLANLPAGKKVDILMLTL LLCIREKDDSIYEDIFSTPFRRAEGGTNVDLLSFLIESYEFENKTILMDFDPRVKFPKFRAYYINEHSHGVYKASLTYYL GLFTTFFGHSYDGDMITFLDCDDEEPESKIEKLLEELRISNPCTDGFAFPEEPAANSWLGCMYYHEEMEKLKPKDYKDLV ELSSSLDWLDD
Sequences:
>Translated_571_residues MKLDISFDWSKSLPIEGGIQSSEVLPPDRLNRKKYAEFIAKFLVSQGYDSKSSERHNYVLNLNAEWGAGKTYFLKRLAED LKPHHPVVYIDAWKQDYSDDPLMTVISSMISQLRKQAGKNADDNIYKAPRKMMALLKAATPAIVGGMTKKFLGIDHLAIM DAVGDEDDIGATLKDENGEDIFDEDGKPIDMGPAASLLVKHLIDEHDAKAKSIENLKVHVKEWVEAVIGLDNAKHKDVNR RLFPAFIFVDELDRCRPSYAVEMLETIKHIFDIPGVVFVVGTDTEQLQHAVKAIYGEGFNARNYLGRFFDSRFTLRQPNI ENLLEVHCDDNKLSGSHFRDLDIVVWPENDSSEINITNIATIINCFDLSARQAIQIANRTIAMLANLPAGKKVDILMLTL LLCIREKDDSIYEDIFSTPFRRAEGGTNVDLLSFLIESYEFENKTILMDFDPRVKFPKFRAYYINEHSHGVYKASLTYYL GLFTTFFGHSYDGDMITFLDCDDEEPESKIEKLLEELRISNPCTDGFAFPEEPAANSWLGCMYYHEEMEKLKPKDYKDLV ELSSSLDWLDD >Mature_571_residues MKLDISFDWSKSLPIEGGIQSSEVLPPDRLNRKKYAEFIAKFLVSQGYDSKSSERHNYVLNLNAEWGAGKTYFLKRLAED LKPHHPVVYIDAWKQDYSDDPLMTVISSMISQLRKQAGKNADDNIYKAPRKMMALLKAATPAIVGGMTKKFLGIDHLAIM DAVGDEDDIGATLKDENGEDIFDEDGKPIDMGPAASLLVKHLIDEHDAKAKSIENLKVHVKEWVEAVIGLDNAKHKDVNR RLFPAFIFVDELDRCRPSYAVEMLETIKHIFDIPGVVFVVGTDTEQLQHAVKAIYGEGFNARNYLGRFFDSRFTLRQPNI ENLLEVHCDDNKLSGSHFRDLDIVVWPENDSSEINITNIATIINCFDLSARQAIQIANRTIAMLANLPAGKKVDILMLTL LLCIREKDDSIYEDIFSTPFRRAEGGTNVDLLSFLIESYEFENKTILMDFDPRVKFPKFRAYYINEHSHGVYKASLTYYL GLFTTFFGHSYDGDMITFLDCDDEEPESKIEKLLEELRISNPCTDGFAFPEEPAANSWLGCMYYHEEMEKLKPKDYKDLV ELSSSLDWLDD
Specific function: Unknown
COG id: COG4928
COG function: function code R; Predicted P-loop ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65044; Mature: 65044
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDISFDWSKSLPIEGGIQSSEVLPPDRLNRKKYAEFIAKFLVSQGYDSKSSERHNYVL CEEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE NLNAEWGAGKTYFLKRLAEDLKPHHPVVYIDAWKQDYSDDPLMTVISSMISQLRKQAGKN EECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC ADDNIYKAPRKMMALLKAATPAIVGGMTKKFLGIDHLAIMDAVGDEDDIGATLKDENGED CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEECCCCCCC IFDEDGKPIDMGPAASLLVKHLIDEHDAKAKSIENLKVHVKEWVEAVIGLDNAKHKDVNR CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH RLFPAFIFVDELDRCRPSYAVEMLETIKHIFDIPGVVFVVGTDTEQLQHAVKAIYGEGFN HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCC ARNYLGRFFDSRFTLRQPNIENLLEVHCDDNKLSGSHFRDLDIVVWPENDSSEINITNIA HHHHHHHHHCCCCEECCCCHHHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCEEHHHHH TIINCFDLSARQAIQIANRTIAMLANLPAGKKVDILMLTLLLCIREKDDSIYEDIFSTPF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC RRAEGGTNVDLLSFLIESYEFENKTILMDFDPRVKFPKFRAYYINEHSHGVYKASLTYYL HHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEHHHHHHHH GLFTTFFGHSYDGDMITFLDCDDEEPESKIEKLLEELRISNPCTDGFAFPEEPAANSWLG HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH CMYYHEEMEKLKPKDYKDLVELSSSLDWLDD HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLDISFDWSKSLPIEGGIQSSEVLPPDRLNRKKYAEFIAKFLVSQGYDSKSSERHNYVL CEEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE NLNAEWGAGKTYFLKRLAEDLKPHHPVVYIDAWKQDYSDDPLMTVISSMISQLRKQAGKN EECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC ADDNIYKAPRKMMALLKAATPAIVGGMTKKFLGIDHLAIMDAVGDEDDIGATLKDENGED CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEECCCCCCC IFDEDGKPIDMGPAASLLVKHLIDEHDAKAKSIENLKVHVKEWVEAVIGLDNAKHKDVNR CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH RLFPAFIFVDELDRCRPSYAVEMLETIKHIFDIPGVVFVVGTDTEQLQHAVKAIYGEGFN HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCC ARNYLGRFFDSRFTLRQPNIENLLEVHCDDNKLSGSHFRDLDIVVWPENDSSEINITNIA HHHHHHHHHCCCCEECCCCHHHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCEEHHHHH TIINCFDLSARQAIQIANRTIAMLANLPAGKKVDILMLTLLLCIREKDDSIYEDIFSTPF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC RRAEGGTNVDLLSFLIESYEFENKTILMDFDPRVKFPKFRAYYINEHSHGVYKASLTYYL HHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEHHHHHHHH GLFTTFFGHSYDGDMITFLDCDDEEPESKIEKLLEELRISNPCTDGFAFPEEPAANSWLG HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH CMYYHEEMEKLKPKDYKDLVELSSSLDWLDD HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA