Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yuxL [H]

Identifier: 157960113

GI number: 157960113

Start: 316835

End: 318895

Strand: Reverse

Name: yuxL [H]

Synonym: Spea_0284

Alternate gene names: 157960113

Gene position: 318895-316835 (Counterclockwise)

Preceding gene: 157960114

Following gene: 157960112

Centisome position: 6.16

GC content: 50.07

Gene sequence:

>2061_bases
ATGAAGCAAGCACACAAGCTTTCTCTGCTCGCTGCCGCGCTGATAGGCAGCAGCTTTTCCGCCATGGCGGCAGACAGAAC
TCACGATATCACCATAGATGACTTTTTCGATATCGGTAACATGGGCTCGGTAACTTTGAGCCCTAATGGTAAACACGCGG
TTTGGTTAGAGTCTCGATGGGACAAGGAGCTCGATAAGAGCCAACGTGATTTATGGCTGCTAGATACCAAATCTCGCCAA
TCAAAACGCATGACTTTCACCAACGAGAGCGAATCAAGCCCCCAGTGGAGTCCTGATGGCGAGTATGTTTACTATCTCGG
CAAAATAAAGCAGGAAGGAGCAAAGGCGCCTTTCAACGGTAAGACTCAGGTGTTTCGCCTGTCAGTCAGCAGCGGCGACA
GTCAACCTATGACCAAAGAAGCGGAAGGCGTGGCAGGATTCGAACTTAGCCATGATGGCAAAAGCTTGTATTTCTTAGCC
ACTAAAACCACAACCGACACAGATCAATGGGCGTCGATGCGCACCAGCCACAGTGCGCCGAAATATGGCCATGGCGAGCA
AAAAACCAATCCGCTATATCAACTCGATCTCGAGCATTTTAAGCAAAAGTTACTCCTCGATGATGACAAAGTCGTTTGGG
AGTTTAAGGTCAGCCAAGATGGCAGCAAGATAGCTCGTATCACCACCACAGACAACGAACTGGTCTTTTTAGAAGGTTGG
TCATACGTTGAGATTTTCGATACCAAAACCAAACAAAACAGCGTGTTAGCAGATACTCAGTGGCGTGATAATGCCCCCTC
AGCTTACGGCTGGCTGCTCGGGCTTGCTTGGCAAGAGAACAACACTGAGCTAGCCTTTAGAATTGACTTTGACGGCCATC
CCGGCCAGCTATTTATCGCTAACGCTAAATCAACCGACAAGCCATCGTTGGAAGTATCACGCCCCGGCGATGTCACCCTC
ACGGCCAGCGATCTGACTTGGCGCCCAAACAGTGATGAACTCTGCTATCGCGGCGCCGATTATGGTCGCGTAAAGCTATT
CTGCACTGAAATAGATGATGGCGAACAAGGCGATACTCGCGCCGTGATCCCCGGTGACATGGTCATAGGCAGTTATAGCT
TTAGCCAAAATGGTAAGTCAGTTGCTTTTAGCCACAACGGCTTAGATCATTTCTCGGATCTGTTTATCGCCGACGCCAAT
AGCAGCCGCGCTAAAGCAAAGCGCCTGACTAATATCAATCCTCAGGTCGATAGCTGGAAGCTACCACAAGTGTCTATCGT
TAAATGGACTGCGCCAGATGGTGCCGTGGTCGAAGGGATTTTAGATCTGCCTGCTGGCTATAAGAAGGAAGACGGTCCAC
TGCCATTGATCGTACAAATTCATGGCGGCCCCACCTCGGCCACCCCTTATGCACTGCAGCATAGATCTTACGGTCGTTCG
ACTTTTACCGCCAACGGCTGGGCCCTGCTATCACCTAACTATCGAGGTTCTACGGGCTATGGTGATAAGTTCTTAACCGA
TCTTGTCGGTCGTGAACACGATATCGAAGTCAAAGATATCATGGCTGGTGTGGATCAATTGATCGCTGATGGCATCGTCG
ATGGTGACAAGATGGCAGTGATGGGCTGGAGTAATGGTGGCTACCTCACCAACGCACTCATCAGCACCAATAACCGTTTC
AAGGCGGCAAGCTCTGGTGCTGGCGTGTTCGATCAACGTCTACAGTGGATGCTTGAAGATACACCGGGGCATGTAGTCAA
CTTTATGGAAGGCCTACCTTGGGAAAAGCCTGAGGCCTATGACCATGGCTCATCGCTAACCTATGCCAATAAGATTAAGA
CCCCGACCTTAATCCATATAGGTGAAGGCGATCAGCGCGTACCTGTGGGTCATGCTCAAGGTCTATATCGCGCGCTGCAC
CACTACCTCAACGTGCCTGTCGAATTAGTAGTGTATCCCGGTGAAGGCCATGGCCTAAGTAAGTACCAACATCGCAAGGC
CAAGATGGAGTGGGATCAGCAGTGGTTTAATCACTATGTTTTAGGCCAAGCTGTCGAATAA

Upstream 100 bases:

>100_bases
ACTGCGTAAAAGTTGCGCTAGTGTATTAACCCTGGTTTTAAAAACCATATAAATAAAATAATAAATAACAGTTAACTTAT
TGAAGGGTAGGAATTAATAC

Downstream 100 bases:

>100_bases
TGTTCCTGTTTAGAATTGATTAACCATCAAAGAAAAGCGCCTATTGGCGCTTTTACCTTGCCTTTAGTATAGATAAGCCC
CGTTACAATTCTGGTATTCA

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRWDKELDKSQRDLWLLDTKSRQ
SKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLA
TKTTTDTDQWASMRTSHSAPKYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW
SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIANAKSTDKPSLEVSRPGDVTL
TASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTRAVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADAN
SSRAKAKRLTNINPQVDSWKLPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS
TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAVMGWSNGGYLTNALISTNNRF
KAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAYDHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALH
HYLNVPVELVVYPGEGHGLSKYQHRKAKMEWDQQWFNHYVLGQAVE

Sequences:

>Translated_686_residues
MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRWDKELDKSQRDLWLLDTKSRQ
SKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLA
TKTTTDTDQWASMRTSHSAPKYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW
SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIANAKSTDKPSLEVSRPGDVTL
TASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTRAVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADAN
SSRAKAKRLTNINPQVDSWKLPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS
TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAVMGWSNGGYLTNALISTNNRF
KAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAYDHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALH
HYLNVPVELVVYPGEGHGLSKYQHRKAKMEWDQQWFNHYVLGQAVE
>Mature_686_residues
MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRWDKELDKSQRDLWLLDTKSRQ
SKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLA
TKTTTDTDQWASMRTSHSAPKYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW
SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIANAKSTDKPSLEVSRPGDVTL
TASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTRAVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADAN
SSRAKAKRLTNINPQVDSWKLPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS
TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAVMGWSNGGYLTNALISTNNRF
KAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAYDHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALH
HYLNVPVELVVYPGEGHGLSKYQHRKAKMEWDQQWFNHYVLGQAVE

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=236, Percent_Identity=31.3559322033898, Blast_Score=97, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17552908, Length=315, Percent_Identity=30.7936507936508, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25149159, Length=237, Percent_Identity=31.6455696202532, Blast_Score=96, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI25144537, Length=289, Percent_Identity=26.2975778546713, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI25144540, Length=289, Percent_Identity=26.2975778546713, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI45551969, Length=320, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45550825, Length=320, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45553511, Length=320, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 76282; Mature: 76282

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRW
CCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEHHHHHCCCCCCEEEECCCCCEEEEECCCC
DKELDKSQRDLWLLDTKSRQSKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNG
CHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
KTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLATKTTTDTDQWASMRTSHSAP
CCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCC
KYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW
CCCCCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECC
SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIA
CEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEE
NAKSTDKPSLEVSRPGDVTLTASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTR
ECCCCCCCCEEECCCCCEEEEECCEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCEE
AVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADANSSRAKAKRLTNINPQVDSWK
EECCCCEEEEEEEECCCCCEEEEECCCCHHHCCEEEECCCCCHHHHHHHCCCCCCCCCCC
LPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS
CCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHHCCCCCC
TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAV
EEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
MGWSNGGYLTNALISTNNRFKAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAY
EEECCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
DHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALHHYLNVPVELVVYPGEGHGLS
CCCCCEEEHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
KYQHRKAKMEWDQQWFNHYVLGQAVE
HHHHHHHCCCHHHHHHHHHHCCEECC
>Mature Secondary Structure
MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRW
CCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEHHHHHCCCCCCEEEECCCCCEEEEECCCC
DKELDKSQRDLWLLDTKSRQSKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNG
CHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
KTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLATKTTTDTDQWASMRTSHSAP
CCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCC
KYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW
CCCCCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECC
SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIA
CEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEE
NAKSTDKPSLEVSRPGDVTLTASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTR
ECCCCCCCCEEECCCCCEEEEECCEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCEE
AVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADANSSRAKAKRLTNINPQVDSWK
EECCCCEEEEEEEECCCCCEEEEECCCCHHHCCEEEECCCCCHHHHHHHCCCCCCCCCCC
LPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS
CCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHHCCCCCC
TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAV
EEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
MGWSNGGYLTNALISTNNRFKAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAY
EEECCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC
DHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALHHYLNVPVELVVYPGEGHGLS
CCCCCEEEHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
KYQHRKAKMEWDQQWFNHYVLGQAVE
HHHHHHHCCCHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]