| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960114
Identifier: 157960114
GI number: 157960114
Start: 319053
End: 319958
Strand: Reverse
Name: 157960114
Synonym: Spea_0285
Alternate gene names: NA
Gene position: 319958-319053 (Counterclockwise)
Preceding gene: 157960115
Following gene: 157960113
Centisome position: 6.18
GC content: 45.36
Gene sequence:
>906_bases ATGAATGAATTTAGCGAGTTTTTCTCTGAAAGTTATTGGTGGCTCTCATTGCTTGGCGGTATTCACTGTCTAGGCCTAGG CTTGTATATCCGCTATATCTACAGTGAAAAAAATGGTAACCATAAGATCCTCGCAAATATTTTCAGTCTTATGGCGCTGT ATTTTTTTACAGGCCTACTGACCAGTAACAATGCTCCCGCGCCTATCCACCTAGTATTCACCCTAATCATCCCTGTTTAC TTCCTTGTGATGCCGTTGCTCTATCTCTACTGCGACCGCAGCCTAAATGACATCGAACAAGCCATTGGTTTTTCGCGTCA CTTTTATCCAGCACTCTTCATCGCTGTTCTAGTCATTATTGCTATAGTCTATCGCCTATTATTCGATAATCACGGGACTG GCATAGGGCTTTCTCAGCCAACTGAAGCCACAGATTTAAGCCTGCTAGCCATGCTGCTACCCGCACTACTCTTTATCCAA ACGGGGCTCTATTTTTACTACATCATTAAAATGCTAAGCCGCTATCCAGGCCGAGCCTCTCGCTTGCACCAAGATAGCCT GAAAGACATCAAGTTTCGCTGGCTACTGGTGCTAACCTTAGCGCTCATGAGCAACTGGCTTATCAGGGCTGTACTTATCA TTTTGCCATTTTATCTAGGCGATCAAGCCATTATGGTCAATCAAGCCACAACGAGGCTGACCATGCTATTAACCGTGTAC ATATTAGCAATCTACGGCCTCAATCAGATCACTCGAGCCGCCTATTTACGTGGCAAGCTTGCCCAGCAGCAGCCCCAAAG AAAGCCTATGCCTGCCAGTCAGCAGCTACTCAGCTCAGAAGAGATAGCCTACTTGCATCAATTGATGCAGGAAGAAAAGC AAAATAAAGACCTGAATCGCCCATAA
Upstream 100 bases:
>100_bases ACAGATAGCAGGAGCTAGCATAAGATATTGCTATCAATTGAACATGTTTAAATATTCAGCACTTGCATCTGGGTGAGCAA TACGTTGAAATGAGTTTAGC
Downstream 100 bases:
>100_bases CCCCATCCATTTGATTCATCATAAAGAAAATCTAAACTAGCGTAATTTTCATAGCCAACTGCGTAAAAGTTGCGCTAGTG TATTAACCCTGGTTTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNEFSEFFSESYWWLSLLGGIHCLGLGLYIRYIYSEKNGNHKILANIFSLMALYFFTGLLTSNNAPAPIHLVFTLIIPVY FLVMPLLYLYCDRSLNDIEQAIGFSRHFYPALFIAVLVIIAIVYRLLFDNHGTGIGLSQPTEATDLSLLAMLLPALLFIQ TGLYFYYIIKMLSRYPGRASRLHQDSLKDIKFRWLLVLTLALMSNWLIRAVLIILPFYLGDQAIMVNQATTRLTMLLTVY ILAIYGLNQITRAAYLRGKLAQQQPQRKPMPASQQLLSSEEIAYLHQLMQEEKQNKDLNRP
Sequences:
>Translated_301_residues MNEFSEFFSESYWWLSLLGGIHCLGLGLYIRYIYSEKNGNHKILANIFSLMALYFFTGLLTSNNAPAPIHLVFTLIIPVY FLVMPLLYLYCDRSLNDIEQAIGFSRHFYPALFIAVLVIIAIVYRLLFDNHGTGIGLSQPTEATDLSLLAMLLPALLFIQ TGLYFYYIIKMLSRYPGRASRLHQDSLKDIKFRWLLVLTLALMSNWLIRAVLIILPFYLGDQAIMVNQATTRLTMLLTVY ILAIYGLNQITRAAYLRGKLAQQQPQRKPMPASQQLLSSEEIAYLHQLMQEEKQNKDLNRP >Mature_301_residues MNEFSEFFSESYWWLSLLGGIHCLGLGLYIRYIYSEKNGNHKILANIFSLMALYFFTGLLTSNNAPAPIHLVFTLIIPVY FLVMPLLYLYCDRSLNDIEQAIGFSRHFYPALFIAVLVIIAIVYRLLFDNHGTGIGLSQPTEATDLSLLAMLLPALLFIQ TGLYFYYIIKMLSRYPGRASRLHQDSLKDIKFRWLLVLTLALMSNWLIRAVLIILPFYLGDQAIMVNQATTRLTMLLTVY ILAIYGLNQITRAAYLRGKLAQQQPQRKPMPASQQLLSSEEIAYLHQLMQEEKQNKDLNRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34617; Mature: 34617
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEFSEFFSESYWWLSLLGGIHCLGLGLYIRYIYSEKNGNHKILANIFSLMALYFFTGLL CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TSNNAPAPIHLVFTLIIPVYFLVMPLLYLYCDRSLNDIEQAIGFSRHFYPALFIAVLVII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHH AIVYRLLFDNHGTGIGLSQPTEATDLSLLAMLLPALLFIQTGLYFYYIIKMLSRYPGRAS HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RLHQDSLKDIKFRWLLVLTLALMSNWLIRAVLIILPFYLGDQAIMVNQATTRLTMLLTVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHH ILAIYGLNQITRAAYLRGKLAQQQPQRKPMPASQQLLSSEEIAYLHQLMQEEKQNKDLNR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC P C >Mature Secondary Structure MNEFSEFFSESYWWLSLLGGIHCLGLGLYIRYIYSEKNGNHKILANIFSLMALYFFTGLL CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TSNNAPAPIHLVFTLIIPVYFLVMPLLYLYCDRSLNDIEQAIGFSRHFYPALFIAVLVII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHH AIVYRLLFDNHGTGIGLSQPTEATDLSLLAMLLPALLFIQTGLYFYYIIKMLSRYPGRAS HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RLHQDSLKDIKFRWLLVLTLALMSNWLIRAVLIILPFYLGDQAIMVNQATTRLTMLLTVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHH ILAIYGLNQITRAAYLRGKLAQQQPQRKPMPASQQLLSSEEIAYLHQLMQEEKQNKDLNR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA