Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960112

Identifier: 157960112

GI number: 157960112

Start: 316110

End: 316676

Strand: Reverse

Name: 157960112

Synonym: Spea_0283

Alternate gene names: NA

Gene position: 316676-316110 (Counterclockwise)

Preceding gene: 157960113

Following gene: 157960110

Centisome position: 6.12

GC content: 49.74

Gene sequence:

>567_bases
ATGTCACGCTTCATCAAGAGGATCACCACCAGCTTATGTTTACTTGCCAGCGTGATGCTTGCGCCACAGGCGCTCGCCGA
AGACGGCTATTCCCAGGCTAAGAGTACCTTTCAACAAGCTAACGAAACTCAGAAATTCTTCAATAACGCCTACGGTTATG
CGCTTTTCCCAACCGTGGGTAAAGGCGGAATAGGCATAGGTGCCGCCTATGGCAAAGGCCGAGTCTATCGTGGTGGCAGC
TATACCGGTGACACCAGCTTAACTCAGATTTCTTTTGGTTTTCAGCTAGGCGGTCAAGCCTACAGTGAAATCATCTTCTT
TAAAGATGAAGCCGCCTACAAAGACTTTACCAGTGGTAGCTTCGAGTTTGGCGCACAAGCCTCTGCCGTGGCCATCACTA
TTGGCGCCAATGCACAAGCAGGCACCACAGGTAACTCAGCTGGTGCAGGTAAAGGCGCAGCCAAGGCAGCCTATATCAAT
GGCATGACAGTATTTACCGTAGCAAAAGGCGGATTAATGTTTGAAGCAGCCCTTGCTGGCCAGTCTTTTACATTTGAAGA
GAAGTAG

Upstream 100 bases:

>100_bases
TGCCTTTAGTATAGATAAGCCCCGTTACAATTCTGGTATTCACTTTCTGTTCAGGATGGGTATGCTAAAGTTTAGCCTGT
CTATGGAATGAGGAGAAAAT

Downstream 100 bases:

>100_bases
GGGAAAAGAAGGTTCTAGGAATAAGCAAAGAGTTAAAGCAAAGACGAGGTCGGGCTTCGCCCTACGAAGACGTGACTTCG
TCACTGCGAGAGAAGATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVGKGGIGIGAAYGKGRVYRGGS
YTGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGSFEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYIN
GMTVFTVAKGGLMFEAALAGQSFTFEEK

Sequences:

>Translated_188_residues
MSRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVGKGGIGIGAAYGKGRVYRGGS
YTGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGSFEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYIN
GMTVFTVAKGGLMFEAALAGQSFTFEEK
>Mature_187_residues
SRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVGKGGIGIGAAYGKGRVYRGGSY
TGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGSFEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYING
MTVFTVAKGGLMFEAALAGQSFTFEEK

Specific function: Unknown

COG id: COG2930

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19552; Mature: 19421

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KGGIGIGAAYGKGRVYRGGSYTGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGS
CCCCEEEEECCCCEEEECCCCCCCCCEEEEEECEEECCHHHEEEEEEECCCCCCCCCCCC
FEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYINGMTVFTVAKGGLMFEAALAG
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCEEEEEECCC
QSFTFEEK
CCEECCCC
>Mature Secondary Structure 
SRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
KGGIGIGAAYGKGRVYRGGSYTGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGS
CCCCEEEEECCCCEEEECCCCCCCCCEEEEEECEEECCHHHEEEEEEECCCCCCCCCCCC
FEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYINGMTVFTVAKGGLMFEAALAG
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCEEEEEECCC
QSFTFEEK
CCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA