| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157960112
Identifier: 157960112
GI number: 157960112
Start: 316110
End: 316676
Strand: Reverse
Name: 157960112
Synonym: Spea_0283
Alternate gene names: NA
Gene position: 316676-316110 (Counterclockwise)
Preceding gene: 157960113
Following gene: 157960110
Centisome position: 6.12
GC content: 49.74
Gene sequence:
>567_bases ATGTCACGCTTCATCAAGAGGATCACCACCAGCTTATGTTTACTTGCCAGCGTGATGCTTGCGCCACAGGCGCTCGCCGA AGACGGCTATTCCCAGGCTAAGAGTACCTTTCAACAAGCTAACGAAACTCAGAAATTCTTCAATAACGCCTACGGTTATG CGCTTTTCCCAACCGTGGGTAAAGGCGGAATAGGCATAGGTGCCGCCTATGGCAAAGGCCGAGTCTATCGTGGTGGCAGC TATACCGGTGACACCAGCTTAACTCAGATTTCTTTTGGTTTTCAGCTAGGCGGTCAAGCCTACAGTGAAATCATCTTCTT TAAAGATGAAGCCGCCTACAAAGACTTTACCAGTGGTAGCTTCGAGTTTGGCGCACAAGCCTCTGCCGTGGCCATCACTA TTGGCGCCAATGCACAAGCAGGCACCACAGGTAACTCAGCTGGTGCAGGTAAAGGCGCAGCCAAGGCAGCCTATATCAAT GGCATGACAGTATTTACCGTAGCAAAAGGCGGATTAATGTTTGAAGCAGCCCTTGCTGGCCAGTCTTTTACATTTGAAGA GAAGTAG
Upstream 100 bases:
>100_bases TGCCTTTAGTATAGATAAGCCCCGTTACAATTCTGGTATTCACTTTCTGTTCAGGATGGGTATGCTAAAGTTTAGCCTGT CTATGGAATGAGGAGAAAAT
Downstream 100 bases:
>100_bases GGGAAAAGAAGGTTCTAGGAATAAGCAAAGAGTTAAAGCAAAGACGAGGTCGGGCTTCGCCCTACGAAGACGTGACTTCG TCACTGCGAGAGAAGATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVGKGGIGIGAAYGKGRVYRGGS YTGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGSFEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYIN GMTVFTVAKGGLMFEAALAGQSFTFEEK
Sequences:
>Translated_188_residues MSRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVGKGGIGIGAAYGKGRVYRGGS YTGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGSFEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYIN GMTVFTVAKGGLMFEAALAGQSFTFEEK >Mature_187_residues SRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVGKGGIGIGAAYGKGRVYRGGSY TGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGSFEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYING MTVFTVAKGGLMFEAALAGQSFTFEEK
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19552; Mature: 19421
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC KGGIGIGAAYGKGRVYRGGSYTGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGS CCCCEEEEECCCCEEEECCCCCCCCCEEEEEECEEECCHHHEEEEEEECCCCCCCCCCCC FEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYINGMTVFTVAKGGLMFEAALAG CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCEEEEEECCC QSFTFEEK CCEECCCC >Mature Secondary Structure SRFIKRITTSLCLLASVMLAPQALAEDGYSQAKSTFQQANETQKFFNNAYGYALFPTVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC KGGIGIGAAYGKGRVYRGGSYTGDTSLTQISFGFQLGGQAYSEIIFFKDEAAYKDFTSGS CCCCEEEEECCCCEEEECCCCCCCCCEEEEEECEEECCHHHEEEEEEECCCCCCCCCCCC FEFGAQASAVAITIGANAQAGTTGNSAGAGKGAAKAAYINGMTVFTVAKGGLMFEAALAG CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCEEEEEECCC QSFTFEEK CCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA