| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yuxL [H]
Identifier: 157960113
GI number: 157960113
Start: 316835
End: 318895
Strand: Reverse
Name: yuxL [H]
Synonym: Spea_0284
Alternate gene names: 157960113
Gene position: 318895-316835 (Counterclockwise)
Preceding gene: 157960114
Following gene: 157960112
Centisome position: 6.16
GC content: 50.07
Gene sequence:
>2061_bases ATGAAGCAAGCACACAAGCTTTCTCTGCTCGCTGCCGCGCTGATAGGCAGCAGCTTTTCCGCCATGGCGGCAGACAGAAC TCACGATATCACCATAGATGACTTTTTCGATATCGGTAACATGGGCTCGGTAACTTTGAGCCCTAATGGTAAACACGCGG TTTGGTTAGAGTCTCGATGGGACAAGGAGCTCGATAAGAGCCAACGTGATTTATGGCTGCTAGATACCAAATCTCGCCAA TCAAAACGCATGACTTTCACCAACGAGAGCGAATCAAGCCCCCAGTGGAGTCCTGATGGCGAGTATGTTTACTATCTCGG CAAAATAAAGCAGGAAGGAGCAAAGGCGCCTTTCAACGGTAAGACTCAGGTGTTTCGCCTGTCAGTCAGCAGCGGCGACA GTCAACCTATGACCAAAGAAGCGGAAGGCGTGGCAGGATTCGAACTTAGCCATGATGGCAAAAGCTTGTATTTCTTAGCC ACTAAAACCACAACCGACACAGATCAATGGGCGTCGATGCGCACCAGCCACAGTGCGCCGAAATATGGCCATGGCGAGCA AAAAACCAATCCGCTATATCAACTCGATCTCGAGCATTTTAAGCAAAAGTTACTCCTCGATGATGACAAAGTCGTTTGGG AGTTTAAGGTCAGCCAAGATGGCAGCAAGATAGCTCGTATCACCACCACAGACAACGAACTGGTCTTTTTAGAAGGTTGG TCATACGTTGAGATTTTCGATACCAAAACCAAACAAAACAGCGTGTTAGCAGATACTCAGTGGCGTGATAATGCCCCCTC AGCTTACGGCTGGCTGCTCGGGCTTGCTTGGCAAGAGAACAACACTGAGCTAGCCTTTAGAATTGACTTTGACGGCCATC CCGGCCAGCTATTTATCGCTAACGCTAAATCAACCGACAAGCCATCGTTGGAAGTATCACGCCCCGGCGATGTCACCCTC ACGGCCAGCGATCTGACTTGGCGCCCAAACAGTGATGAACTCTGCTATCGCGGCGCCGATTATGGTCGCGTAAAGCTATT CTGCACTGAAATAGATGATGGCGAACAAGGCGATACTCGCGCCGTGATCCCCGGTGACATGGTCATAGGCAGTTATAGCT TTAGCCAAAATGGTAAGTCAGTTGCTTTTAGCCACAACGGCTTAGATCATTTCTCGGATCTGTTTATCGCCGACGCCAAT AGCAGCCGCGCTAAAGCAAAGCGCCTGACTAATATCAATCCTCAGGTCGATAGCTGGAAGCTACCACAAGTGTCTATCGT TAAATGGACTGCGCCAGATGGTGCCGTGGTCGAAGGGATTTTAGATCTGCCTGCTGGCTATAAGAAGGAAGACGGTCCAC TGCCATTGATCGTACAAATTCATGGCGGCCCCACCTCGGCCACCCCTTATGCACTGCAGCATAGATCTTACGGTCGTTCG ACTTTTACCGCCAACGGCTGGGCCCTGCTATCACCTAACTATCGAGGTTCTACGGGCTATGGTGATAAGTTCTTAACCGA TCTTGTCGGTCGTGAACACGATATCGAAGTCAAAGATATCATGGCTGGTGTGGATCAATTGATCGCTGATGGCATCGTCG ATGGTGACAAGATGGCAGTGATGGGCTGGAGTAATGGTGGCTACCTCACCAACGCACTCATCAGCACCAATAACCGTTTC AAGGCGGCAAGCTCTGGTGCTGGCGTGTTCGATCAACGTCTACAGTGGATGCTTGAAGATACACCGGGGCATGTAGTCAA CTTTATGGAAGGCCTACCTTGGGAAAAGCCTGAGGCCTATGACCATGGCTCATCGCTAACCTATGCCAATAAGATTAAGA CCCCGACCTTAATCCATATAGGTGAAGGCGATCAGCGCGTACCTGTGGGTCATGCTCAAGGTCTATATCGCGCGCTGCAC CACTACCTCAACGTGCCTGTCGAATTAGTAGTGTATCCCGGTGAAGGCCATGGCCTAAGTAAGTACCAACATCGCAAGGC CAAGATGGAGTGGGATCAGCAGTGGTTTAATCACTATGTTTTAGGCCAAGCTGTCGAATAA
Upstream 100 bases:
>100_bases ACTGCGTAAAAGTTGCGCTAGTGTATTAACCCTGGTTTTAAAAACCATATAAATAAAATAATAAATAACAGTTAACTTAT TGAAGGGTAGGAATTAATAC
Downstream 100 bases:
>100_bases TGTTCCTGTTTAGAATTGATTAACCATCAAAGAAAAGCGCCTATTGGCGCTTTTACCTTGCCTTTAGTATAGATAAGCCC CGTTACAATTCTGGTATTCA
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRWDKELDKSQRDLWLLDTKSRQ SKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLA TKTTTDTDQWASMRTSHSAPKYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIANAKSTDKPSLEVSRPGDVTL TASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTRAVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADAN SSRAKAKRLTNINPQVDSWKLPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAVMGWSNGGYLTNALISTNNRF KAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAYDHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALH HYLNVPVELVVYPGEGHGLSKYQHRKAKMEWDQQWFNHYVLGQAVE
Sequences:
>Translated_686_residues MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRWDKELDKSQRDLWLLDTKSRQ SKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLA TKTTTDTDQWASMRTSHSAPKYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIANAKSTDKPSLEVSRPGDVTL TASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTRAVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADAN SSRAKAKRLTNINPQVDSWKLPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAVMGWSNGGYLTNALISTNNRF KAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAYDHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALH HYLNVPVELVVYPGEGHGLSKYQHRKAKMEWDQQWFNHYVLGQAVE >Mature_686_residues MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRWDKELDKSQRDLWLLDTKSRQ SKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLA TKTTTDTDQWASMRTSHSAPKYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIANAKSTDKPSLEVSRPGDVTL TASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTRAVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADAN SSRAKAKRLTNINPQVDSWKLPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAVMGWSNGGYLTNALISTNNRF KAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAYDHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALH HYLNVPVELVVYPGEGHGLSKYQHRKAKMEWDQQWFNHYVLGQAVE
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=236, Percent_Identity=31.3559322033898, Blast_Score=97, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17552908, Length=315, Percent_Identity=30.7936507936508, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25149159, Length=237, Percent_Identity=31.6455696202532, Blast_Score=96, Evalue=9e-20, Organism=Caenorhabditis elegans, GI25144537, Length=289, Percent_Identity=26.2975778546713, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI25144540, Length=289, Percent_Identity=26.2975778546713, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI45551969, Length=320, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550825, Length=320, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI45553511, Length=320, Percent_Identity=27.5, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 76282; Mature: 76282
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRW CCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEHHHHHCCCCCCEEEECCCCCEEEEECCCC DKELDKSQRDLWLLDTKSRQSKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNG CHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC KTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLATKTTTDTDQWASMRTSHSAP CCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCC KYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW CCCCCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECC SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIA CEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEE NAKSTDKPSLEVSRPGDVTLTASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTR ECCCCCCCCEEECCCCCEEEEECCEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCEE AVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADANSSRAKAKRLTNINPQVDSWK EECCCCEEEEEEEECCCCCEEEEECCCCHHHCCEEEECCCCCHHHHHHHCCCCCCCCCCC LPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS CCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHHCCCCCC TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAV EEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE MGWSNGGYLTNALISTNNRFKAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAY EEECCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC DHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALHHYLNVPVELVVYPGEGHGLS CCCCCEEEHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC KYQHRKAKMEWDQQWFNHYVLGQAVE HHHHHHHCCCHHHHHHHHHHCCEECC >Mature Secondary Structure MKQAHKLSLLAAALIGSSFSAMAADRTHDITIDDFFDIGNMGSVTLSPNGKHAVWLESRW CCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEHHHHHCCCCCCEEEECCCCCEEEEECCCC DKELDKSQRDLWLLDTKSRQSKRMTFTNESESSPQWSPDGEYVYYLGKIKQEGAKAPFNG CHHHCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC KTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLATKTTTDTDQWASMRTSHSAP CCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCC KYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW CCCCCCCCCCCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECC SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIA CEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEE NAKSTDKPSLEVSRPGDVTLTASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTR ECCCCCCCCEEECCCCCEEEEECCEEECCCCCCEEEECCCCCEEEEEEEECCCCCCCCEE AVIPGDMVIGSYSFSQNGKSVAFSHNGLDHFSDLFIADANSSRAKAKRLTNINPQVDSWK EECCCCEEEEEEEECCCCCEEEEECCCCHHHCCEEEECCCCCHHHHHHHCCCCCCCCCCC LPQVSIVKWTAPDGAVVEGILDLPAGYKKEDGPLPLIVQIHGGPTSATPYALQHRSYGRS CCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHHCCCCCC TFTANGWALLSPNYRGSTGYGDKFLTDLVGREHDIEVKDIMAGVDQLIADGIVDGDKMAV EEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE MGWSNGGYLTNALISTNNRFKAASSGAGVFDQRLQWMLEDTPGHVVNFMEGLPWEKPEAY EEECCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC DHGSSLTYANKIKTPTLIHIGEGDQRVPVGHAQGLYRALHHYLNVPVELVVYPGEGHGLS CCCCCEEEHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC KYQHRKAKMEWDQQWFNHYVLGQAVE HHHHHHHCCCHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]