| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960106
Identifier: 157960106
GI number: 157960106
Start: 309273
End: 310493
Strand: Reverse
Name: 157960106
Synonym: Spea_0277
Alternate gene names: NA
Gene position: 310493-309273 (Counterclockwise)
Preceding gene: 157960110
Following gene: 157960105
Centisome position: 6.0
GC content: 47.26
Gene sequence:
>1221_bases GTGGATAATCAAGAGTTTTTAGAAAAGCGCCGTTTCATCATTAGGCTCGGTAAGGCACTGCATAAATTTGGTACTCCGGC CTACCGCCTTGAAGCCCACTTGCAAGGTGTGTCTAACGTGCTCGGCATTGAAGGTTATTTTTTGATTTCGCCTACTGCGA TGACTTTTGTGCTGCAACATGAGGAAGACCAAGAATATAACCACGTCGCCCGAGTGAAACCCGGTGAACTCGATTTAGGC TCACTAGCTAGAACCGATGAGTTAGTCGAAGAGCTCATGTCTGGTCAACGCACGCTTAGTGAGGCACTTGAACGTCTAGA AGAAATTGCCAATAAGCCTAACCCCTACGGCACCAAATTAACCCTAATGGCCTTTGGCACTTCAGCAGGTGCTTTTGCCA TGTTAATGGGCACCAGTTGGAACGATGTGTTCTGGTCAGGAATATTAGGCTTAATGGTTTATGGTTTAGTCTATCGCGCC GAGCGCTCTAAACGCATGGCTGAGATGCTTGAACCTCTCGCCGCCATTTTATGCGCTATTGCCGCCTATGCCATTGCCCA ATTTGATCCCTCGGTGAATATTCCCGTAGTGATCCTCTCTGGCATTATCATTTTCATACCCGGTTTAGCCTTGACGCTCG GCTTAGCCGAACTGGCTGCACGAGATTTAATCTCAGGTACAGCAAGGGTCATGGATGCCTTCATGTTGCTATTTAAGCTC TATTTTGGGGTGATCTTAGGCATGGCTATAGGTAAGACACTATTTGGTGAAGTAACCTATCAGCCGCCAGAATCTTTACC CCAGTGGGGAATTTGGGCGGCGGTCCCCATTCTTTCTACAGCGCTAGTGATTATCTTTAAAGCGCGTCTAAAAGATTCAC CATGGGGGATTATGGCGGGCATCGTCGCCTTCTTCTCAGCCATGTTAGGTGGACTCTATTTTGGCGAATCTATCGGTATT TTCTTTGGTGCATTAGCAGTAGGCGTATACTCCAACCTCTTCGCCCGCTGGATGAAGGCTCCCGCCTCTATCGCACTCTT ACAAGGTATCGTCATCTTAGTACCCGGCAGCAAAACCTATATCGGCCTTAATACCTTAATCTTGGGTGAGACTATCTTTA ATCAGTCGCACTTAGGCATTCAAATCTTCTTAATTTTCATGTCAATTGTTGCGGGCTTAATTTTTGCCAATGTCGCAGTG CCACCAAGGCGCACCCTGTAA
Upstream 100 bases:
>100_bases TGCCAAGTGAGCATCTGCGCCGAACAACCAATAACAATCATAATAAGCAGTTGTTTAATCAAGCGAATCATCCTGAAGTC ACCTATAGCGAAGTAAGATA
Downstream 100 bases:
>100_bases GAATTAACGGCAATCAATACCGAAAAAGAGCGCTTATAGGCGCTCTTTTTATTAGGCTAAAACCTCTCGACTTTAATCTA ACTTCCAAGTTTAGCCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDNQEFLEKRRFIIRLGKALHKFGTPAYRLEAHLQGVSNVLGIEGYFLISPTAMTFVLQHEEDQEYNHVARVKPGELDLG SLARTDELVEELMSGQRTLSEALERLEEIANKPNPYGTKLTLMAFGTSAGAFAMLMGTSWNDVFWSGILGLMVYGLVYRA ERSKRMAEMLEPLAAILCAIAAYAIAQFDPSVNIPVVILSGIIIFIPGLALTLGLAELAARDLISGTARVMDAFMLLFKL YFGVILGMAIGKTLFGEVTYQPPESLPQWGIWAAVPILSTALVIIFKARLKDSPWGIMAGIVAFFSAMLGGLYFGESIGI FFGALAVGVYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNTLILGETIFNQSHLGIQIFLIFMSIVAGLIFANVAV PPRRTL
Sequences:
>Translated_406_residues MDNQEFLEKRRFIIRLGKALHKFGTPAYRLEAHLQGVSNVLGIEGYFLISPTAMTFVLQHEEDQEYNHVARVKPGELDLG SLARTDELVEELMSGQRTLSEALERLEEIANKPNPYGTKLTLMAFGTSAGAFAMLMGTSWNDVFWSGILGLMVYGLVYRA ERSKRMAEMLEPLAAILCAIAAYAIAQFDPSVNIPVVILSGIIIFIPGLALTLGLAELAARDLISGTARVMDAFMLLFKL YFGVILGMAIGKTLFGEVTYQPPESLPQWGIWAAVPILSTALVIIFKARLKDSPWGIMAGIVAFFSAMLGGLYFGESIGI FFGALAVGVYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNTLILGETIFNQSHLGIQIFLIFMSIVAGLIFANVAV PPRRTL >Mature_406_residues MDNQEFLEKRRFIIRLGKALHKFGTPAYRLEAHLQGVSNVLGIEGYFLISPTAMTFVLQHEEDQEYNHVARVKPGELDLG SLARTDELVEELMSGQRTLSEALERLEEIANKPNPYGTKLTLMAFGTSAGAFAMLMGTSWNDVFWSGILGLMVYGLVYRA ERSKRMAEMLEPLAAILCAIAAYAIAQFDPSVNIPVVILSGIIIFIPGLALTLGLAELAARDLISGTARVMDAFMLLFKL YFGVILGMAIGKTLFGEVTYQPPESLPQWGIWAAVPILSTALVIIFKARLKDSPWGIMAGIVAFFSAMLGGLYFGESIGI FFGALAVGVYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNTLILGETIFNQSHLGIQIFLIFMSIVAGLIFANVAV PPRRTL
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44321; Mature: 44321
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNQEFLEKRRFIIRLGKALHKFGTPAYRLEAHLQGVSNVLGIEGYFLISPTAMTFVLQH CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHEEEEEC EEDQEYNHVARVKPGELDLGSLARTDELVEELMSGQRTLSEALERLEEIANKPNPYGTKL CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE TLMAFGTSAGAFAMLMGTSWNDVFWSGILGLMVYGLVYRAERSKRMAEMLEPLAAILCAI EEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAYAIAQFDPSVNIPVVILSGIIIFIPGLALTLGLAELAARDLISGTARVMDAFMLLFKL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFGVILGMAIGKTLFGEVTYQPPESLPQWGIWAAVPILSTALVIIFKARLKDSPWGIMAG HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVAFFSAMLGGLYFGESIGIFFGALAVGVYSNLFARWMKAPASIALLQGIVILVPGSKTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCEE IGLNTLILGETIFNQSHLGIQIFLIFMSIVAGLIFANVAVPPRRTL EEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDNQEFLEKRRFIIRLGKALHKFGTPAYRLEAHLQGVSNVLGIEGYFLISPTAMTFVLQH CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHEEEEEC EEDQEYNHVARVKPGELDLGSLARTDELVEELMSGQRTLSEALERLEEIANKPNPYGTKL CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE TLMAFGTSAGAFAMLMGTSWNDVFWSGILGLMVYGLVYRAERSKRMAEMLEPLAAILCAI EEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAYAIAQFDPSVNIPVVILSGIIIFIPGLALTLGLAELAARDLISGTARVMDAFMLLFKL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFGVILGMAIGKTLFGEVTYQPPESLPQWGIWAAVPILSTALVIIFKARLKDSPWGIMAG HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVAFFSAMLGGLYFGESIGIFFGALAVGVYSNLFARWMKAPASIALLQGIVILVPGSKTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCEE IGLNTLILGETIFNQSHLGIQIFLIFMSIVAGLIFANVAVPPRRTL EEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA