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The map label for this gene is yraP [C]

Identifier: 157960078

GI number: 157960078

Start: 278764

End: 279333

Strand: Reverse

Name: yraP [C]

Synonym: Spea_0249

Alternate gene names: 157960078

Gene position: 279333-278764 (Counterclockwise)

Preceding gene: 157960079

Following gene: 157960076

Centisome position: 5.4

GC content: 46.14

Gene sequence:

>570_bases
ATGAGAGCACTGCTCCCATTAATCGCCGTTGTATTAATGCTGCAAGGCTGCGCAGGAGCCATTATGGTCGGCGCAGTTGG
CGGTGCAATGATGGTTAATGACGAGCGCAGCTTTAAGACTCAAATTGACGATACTAATGCCGACTTTAATGTCTCAGCCG
CGTTGTCCTCTCATGATGATCTGAATAATCAGGCCAACATTAGCGGCATAGTCATGAACTCAAATGTATTGATGATTGGC
CAATCGCCAAACTCTATGCTGAGAGATAAAGCCATTCGCGTGGTTAAAGAATTGCAGATTGGTGGCAAGATCCACAACCA
GATCCGCATAGGTAATCCCACCTCATTTACTACCCGTAGCAACGACACCTGGATCACCACTAAGGTGAAGGGACGTATGC
TTAATGAGAAAGGCTTAGATGTCACTAACATCAAAGTCGTGACTGAAAATGGCGAAGTGTTTCTGATTGGCTATGTTGAG
CGAGATCAGGCCGACTTAGCCGTTGAGGTCGCTCGAAATACCGCTGGCGTACGTAAAGTCATTAAGGTATTTGAATACAC
GGACTCTTAA

Upstream 100 bases:

>100_bases
CTTCAAACGTGACGGCACGTATTCAGGAAGTTCACCTGCTAGCGATTCACTGCCTATGTGACAATATCGACCGCACACTA
TTCCCGCAGGACGAGCAGGC

Downstream 100 bases:

>100_bases
TCTGTAATACAGAGACGTCCACCAGCGATTAAAGAAATCATCCAGCCTTTTGCTCGATGATTTTTTTTGGTCTTAAATAA
GCTATCCGAGCCGCAACCCA

Product: transport-associated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRALLPLIAVVLMLQGCAGAIMVGAVGGAMMVNDERSFKTQIDDTNADFNVSAALSSHDDLNNQANISGIVMNSNVLMIG
QSPNSMLRDKAIRVVKELQIGGKIHNQIRIGNPTSFTTRSNDTWITTKVKGRMLNEKGLDVTNIKVVTENGEVFLIGYVE
RDQADLAVEVARNTAGVRKVIKVFEYTDS

Sequences:

>Translated_189_residues
MRALLPLIAVVLMLQGCAGAIMVGAVGGAMMVNDERSFKTQIDDTNADFNVSAALSSHDDLNNQANISGIVMNSNVLMIG
QSPNSMLRDKAIRVVKELQIGGKIHNQIRIGNPTSFTTRSNDTWITTKVKGRMLNEKGLDVTNIKVVTENGEVFLIGYVE
RDQADLAVEVARNTAGVRKVIKVFEYTDS
>Mature_189_residues
MRALLPLIAVVLMLQGCAGAIMVGAVGGAMMVNDERSFKTQIDDTNADFNVSAALSSHDDLNNQANISGIVMNSNVLMIG
QSPNSMLRDKAIRVVKELQIGGKIHNQIRIGNPTSFTTRSNDTWITTKVKGRMLNEKGLDVTNIKVVTENGEVFLIGYVE
RDQADLAVEVARNTAGVRKVIKVFEYTDS

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=189, Percent_Identity=37.037037037037, Blast_Score=126, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20553; Mature: 20553

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLPLIAVVLMLQGCAGAIMVGAVGGAMMVNDERSFKTQIDDTNADFNVSAALSSHDD
CCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEECCCCC
LNNQANISGIVMNSNVLMIGQSPNSMLRDKAIRVVKELQIGGKIHNQIRIGNPTSFTTRS
CCCCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCEEECEEEECCCCCEEECC
NDTWITTKVKGRMLNEKGLDVTNIKVVTENGEVFLIGYVERDQADLAVEVARNTAGVRKV
CCCEEEEEECCEEECCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEHHCHHHHHHH
IKVFEYTDS
HHHHHCCCC
>Mature Secondary Structure
MRALLPLIAVVLMLQGCAGAIMVGAVGGAMMVNDERSFKTQIDDTNADFNVSAALSSHDD
CCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEEECCCCCCCEEEEEEECCCCC
LNNQANISGIVMNSNVLMIGQSPNSMLRDKAIRVVKELQIGGKIHNQIRIGNPTSFTTRS
CCCCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCEEECEEEECCCCCEEECC
NDTWITTKVKGRMLNEKGLDVTNIKVVTENGEVFLIGYVERDQADLAVEVARNTAGVRKV
CCCEEEEEECCEEECCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEHHCHHHHHHH
IKVFEYTDS
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]