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The map label for this gene is yoaF [C]

Identifier: 157959954

GI number: 157959954

Start: 135909

End: 136391

Strand: Reverse

Name: yoaF [C]

Synonym: Spea_0124

Alternate gene names: 157959954

Gene position: 136391-135909 (Counterclockwise)

Preceding gene: 157959957

Following gene: 157959945

Centisome position: 2.64

GC content: 50.72

Gene sequence:

>483_bases
ATGAATACATGTTTATCTCTAAGTCACAGCCTAAGTCGCTGCGCAAAAATCGCCACAATCAGTGTAGCTGTCGCACTACT
TTCCGCCTGCAACCCTTCAGCTGAAAGCCAAGCTCCGAAAGCTGAAAACACGGCAAAACCCGTTCAGCTAGCCAATCCAG
CCTCAACCTATTGTGTGTCACTTGGCGGCGAACTGGAAATTGAAAAACAAGCGGAGGGGGAAGTCGGTTATTGCACCCTA
CCGAGTGGCGAGCGTATAGAGGAGTGGAGCTTGTATCGTAGAGAGCACCAGCCAGATAGCTCTGTCTCAGAGACCAGTTC
CGAGCAGCATAAACCTCGGGTGGGCAAGCCGAACCCAGCGACACAAAACTGTATTGCCCAAGGTGGCAGCGTCGATCTTG
CGACCAGTATCTGTACCTTACCCAGTGGTGAGCAAATAGAGCAATGGCAATTGTATCGTCGCGACAATAAAGTCTCGGAA
TAA

Upstream 100 bases:

>100_bases
AAATTAACATGCAAATGGAGTAACCCTTTTGTGCTGCTATTACGTTAGTAAAGTGACCAACTTAATATCAAGCCTGATAA
AGATCGCAACGGAGCCGCTA

Downstream 100 bases:

>100_bases
AAGCGAGCACCACTATGATGAGGGTTATTCAATTGAACGCGCTGTCGCCATCAATAACCCTTTCTCAACCCAGATAGATA
CGGCAACCCCTCTCTCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNTCLSLSHSLSRCAKIATISVAVALLSACNPSAESQAPKAENTAKPVQLANPASTYCVSLGGELEIEKQAEGEVGYCTL
PSGERIEEWSLYRREHQPDSSVSETSSEQHKPRVGKPNPATQNCIAQGGSVDLATSICTLPSGEQIEQWQLYRRDNKVSE

Sequences:

>Translated_160_residues
MNTCLSLSHSLSRCAKIATISVAVALLSACNPSAESQAPKAENTAKPVQLANPASTYCVSLGGELEIEKQAEGEVGYCTL
PSGERIEEWSLYRREHQPDSSVSETSSEQHKPRVGKPNPATQNCIAQGGSVDLATSICTLPSGEQIEQWQLYRRDNKVSE
>Mature_160_residues
MNTCLSLSHSLSRCAKIATISVAVALLSACNPSAESQAPKAENTAKPVQLANPASTYCVSLGGELEIEKQAEGEVGYCTL
PSGERIEEWSLYRREHQPDSSVSETSSEQHKPRVGKPNPATQNCIAQGGSVDLATSICTLPSGEQIEQWQLYRRDNKVSE

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=80, Percent_Identity=37.5, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17234; Mature: 17234

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTCLSLSHSLSRCAKIATISVAVALLSACNPSAESQAPKAENTAKPVQLANPASTYCVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE
LGGELEIEKQAEGEVGYCTLPSGERIEEWSLYRREHQPDSSVSETSSEQHKPRVGKPNPA
CCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCC
TQNCIAQGGSVDLATSICTLPSGEQIEQWQLYRRDNKVSE
HHHHHHCCCCEEHHHHEECCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNTCLSLSHSLSRCAKIATISVAVALLSACNPSAESQAPKAENTAKPVQLANPASTYCVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE
LGGELEIEKQAEGEVGYCTLPSGERIEEWSLYRREHQPDSSVSETSSEQHKPRVGKPNPA
CCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCC
TQNCIAQGGSVDLATSICTLPSGEQIEQWQLYRRDNKVSE
HHHHHHCCCCEEHHHHEECCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA