| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959949
Identifier: 157959949
GI number: 157959949
Start: 132694
End: 132978
Strand: Direct
Name: 157959949
Synonym: Spea_0119
Alternate gene names: NA
Gene position: 132694-132978 (Clockwise)
Preceding gene: 157959948
Following gene: 157959950
Centisome position: 2.56
GC content: 50.88
Gene sequence:
>285_bases ATGAAATCGACTAAAACAGCCATAGGCGCAACCGTAGCAGGCATTCTTGCTGCCAGTCTTTCGTTAGGGGCGCAAGCGGT GCCCGATCAACCCAAAGAGTGGGAGAAGTGTGCTGGCGTAGCAAAAGCTGGAGCAAATGATTGTGGTGCCTTAGATGGCA GCCATGGTTGTGCTGGCCAAGCTAAAGAAGACAATATGCCGACGGAATGGATTTATGTGCCAGCAGGGACTTGCGACAAG ATCACTGGCGGTAAAGTTAAAGCCGTTAAACCGGCTAAAAGCTAG
Upstream 100 bases:
>100_bases TTTTATTGGACTAGAATTAATTTTGACCTTGATGCAATCAATAACGATTGAGATTCGTTATAGCTATTGAACATCTTATC AATCAAAAGGACATTCTGAT
Downstream 100 bases:
>100_bases TGCCTTTATCAAGCATTAGGGGCGCAGGCATAGGTCTGCGTACTCCCCATGTAAAGCAGTTACTAGCGGATGAATCCTTA TCCTTACAAATCCCTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MKSTKTAIGATVAGILAASLSLGAQAVPDQPKEWEKCAGVAKAGANDCGALDGSHGCAGQAKEDNMPTEWIYVPAGTCDK ITGGKVKAVKPAKS
Sequences:
>Translated_94_residues MKSTKTAIGATVAGILAASLSLGAQAVPDQPKEWEKCAGVAKAGANDCGALDGSHGCAGQAKEDNMPTEWIYVPAGTCDK ITGGKVKAVKPAKS >Mature_94_residues MKSTKTAIGATVAGILAASLSLGAQAVPDQPKEWEKCAGVAKAGANDCGALDGSHGCAGQAKEDNMPTEWIYVPAGTCDK ITGGKVKAVKPAKS
Specific function: Unknown
COG id: COG5572
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9401; Mature: 9401
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTKTAIGATVAGILAASLSLGAQAVPDQPKEWEKCAGVAKAGANDCGALDGSHGCAGQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AKEDNMPTEWIYVPAGTCDKITGGKVKAVKPAKS CCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MKSTKTAIGATVAGILAASLSLGAQAVPDQPKEWEKCAGVAKAGANDCGALDGSHGCAGQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AKEDNMPTEWIYVPAGTCDKITGGKVKAVKPAKS CCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA