| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959950
Identifier: 157959950
GI number: 157959950
Start: 132978
End: 133850
Strand: Direct
Name: 157959950
Synonym: Spea_0120
Alternate gene names: NA
Gene position: 132978-133850 (Clockwise)
Preceding gene: 157959949
Following gene: 157959951
Centisome position: 2.57
GC content: 48.0
Gene sequence:
>873_bases GTGCCTTTATCAAGCATTAGGGGCGCAGGCATAGGTCTGCGTACTCCCCATGTAAAGCAGTTACTAGCGGATGAATCCTT ATCCTTACAAATCCCTTGGCTTGAAGTACTAGTAGATAACTGGTTGGTCGATGGTGGATTAAACCAACATCTACTCAAGG CTGTCAGTGAACGCTTTGCGTTAGTCTTTCATAGCGTCGGGCTATCACTTGGTGGCCAAAACTCTCTTGATCTTGATTAT CTTCGGCAGATAAAAGCCTTAAAAGAACAATGTGGTGCGCATTGGTATTCTGAGCATGCCAGCTTCTCCGGCAATGACGA CTTTAAGGTTGCCGACCTGCTGCCATTGCCATACACCCAAGAGGCGGTGATGCATATCAGTCAGCGTATTAAGCAGACTC AAGATTTTCTGGGTGAAAGGATTTTGCTAGAAAACGTGTCTACCTATATGAGCTGTCGTCACAACGAGTTGAGCGAGGGG GAGTTTATTGCAGCCATAGCCGAAGAAGCCGATTGTTACCTGTTACTCGATATCAATAATGCATTCGTGACCAGCGTTAA CCTCAATCAATCGATGCAGTCGTTTATGGATGCTATTCCGGTCGAGCGGGTTAAGCAGATCCATCTTGCGGGGTTCCACG ATAAGGGGGATTACCTGCTCGATGCCCATAATCATCCCGTTGCTCCTAGCGTCTGGGCGGCATTTAGCGCATACATTCAG CAGCATGGAGCGATTGCCAGCATGATTGAATGGGATAGCGAATTACCGACGTTGGAGCGTTTACTGCAAGAGCGACAAAT TGCAGCCGATATATTACGAGAACCGGCAGTAGTTGGTGCTAGAGATGGTGTAGGTGACGAGCGATGCGCTTAG
Upstream 100 bases:
>100_bases AAGAAGACAATATGCCGACGGAATGGATTTATGTGCCAGCAGGGACTTGCGACAAGATCACTGGCGGTAAAGTTAAAGCC GTTAAACCGGCTAAAAGCTA
Downstream 100 bases:
>100_bases CAGATTGGCAAAAGGCCTTCATTCAGGCGCTCGAGCCGCAAGGCAGCGCAACTCGTCTTGTCCAATTAGTTAACGAGGCA GAGCAGAATAGGCTAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPLSSIRGAGIGLRTPHVKQLLADESLSLQIPWLEVLVDNWLVDGGLNQHLLKAVSERFALVFHSVGLSLGGQNSLDLDY LRQIKALKEQCGAHWYSEHASFSGNDDFKVADLLPLPYTQEAVMHISQRIKQTQDFLGERILLENVSTYMSCRHNELSEG EFIAAIAEEADCYLLLDINNAFVTSVNLNQSMQSFMDAIPVERVKQIHLAGFHDKGDYLLDAHNHPVAPSVWAAFSAYIQ QHGAIASMIEWDSELPTLERLLQERQIAADILREPAVVGARDGVGDERCA
Sequences:
>Translated_290_residues MPLSSIRGAGIGLRTPHVKQLLADESLSLQIPWLEVLVDNWLVDGGLNQHLLKAVSERFALVFHSVGLSLGGQNSLDLDY LRQIKALKEQCGAHWYSEHASFSGNDDFKVADLLPLPYTQEAVMHISQRIKQTQDFLGERILLENVSTYMSCRHNELSEG EFIAAIAEEADCYLLLDINNAFVTSVNLNQSMQSFMDAIPVERVKQIHLAGFHDKGDYLLDAHNHPVAPSVWAAFSAYIQ QHGAIASMIEWDSELPTLERLLQERQIAADILREPAVVGARDGVGDERCA >Mature_289_residues PLSSIRGAGIGLRTPHVKQLLADESLSLQIPWLEVLVDNWLVDGGLNQHLLKAVSERFALVFHSVGLSLGGQNSLDLDYL RQIKALKEQCGAHWYSEHASFSGNDDFKVADLLPLPYTQEAVMHISQRIKQTQDFLGERILLENVSTYMSCRHNELSEGE FIAAIAEEADCYLLLDINNAFVTSVNLNQSMQSFMDAIPVERVKQIHLAGFHDKGDYLLDAHNHPVAPSVWAAFSAYIQQ HGAIASMIEWDSELPTLERLLQERQIAADILREPAVVGARDGVGDERCA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 32285; Mature: 32154
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSSIRGAGIGLRTPHVKQLLADESLSLQIPWLEVLVDNWLVDGGLNQHLLKAVSERFA CCCCCCCCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LVFHSVGLSLGGQNSLDLDYLRQIKALKEQCGAHWYSEHASFSGNDDFKVADLLPLPYTQ HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCHH EAVMHISQRIKQTQDFLGERILLENVSTYMSCRHNELSEGEFIAAIAEEADCYLLLDINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCC AFVTSVNLNQSMQSFMDAIPVERVKQIHLAGFHDKGDYLLDAHNHPVAPSVWAAFSAYIQ EEEEEECHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH QHGAIASMIEWDSELPTLERLLQERQIAADILREPAVVGARDGVGDERCA HCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLSSIRGAGIGLRTPHVKQLLADESLSLQIPWLEVLVDNWLVDGGLNQHLLKAVSERFA CCCCCCCCCCCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LVFHSVGLSLGGQNSLDLDYLRQIKALKEQCGAHWYSEHASFSGNDDFKVADLLPLPYTQ HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCHH EAVMHISQRIKQTQDFLGERILLENVSTYMSCRHNELSEGEFIAAIAEEADCYLLLDINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCC AFVTSVNLNQSMQSFMDAIPVERVKQIHLAGFHDKGDYLLDAHNHPVAPSVWAAFSAYIQ EEEEEECHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH QHGAIASMIEWDSELPTLERLLQERQIAADILREPAVVGARDGVGDERCA HCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA