| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826333
Identifier: 157826333
GI number: 157826333
Start: 1186519
End: 1187472
Strand: Reverse
Name: 157826333
Synonym: A1C_06610
Alternate gene names: NA
Gene position: 1187472-1186519 (Counterclockwise)
Preceding gene: 157826334
Following gene: 157826332
Centisome position: 96.46
GC content: 26.62
Gene sequence:
>954_bases ATGAATAATGCAATAGTACTTAATAACATAAATACTAATTTATTTAAAAAAGATATTGTTAATAATTTTGTCAATAATCT TACGCAATCTACTTGCTCTACTATTGCAAATATGCTGGCTATAGATTATACGCTAAGGCTTAATTCTAAGCCGGAAGCTG AAAAATATATTAATAAATGTATTTCTAGACTCAAAAATTATTTAGGTATGCGGGTTATTAATGATGATAATTTTTCCGTA GCATTGGAGTTATTTGCAATAATGATTACTTCTGAAAATGAAAATGAGCAAAATAAGAATAATATTTTACAGCAATCACA AGATATAATAGCAGAAAATCTTGTAGAGGTTTATTTTGGAGATAAAAAAATAAATAGTACCGAAAAAGAAAAAGTTAAAA ATATATTTAAAACTCTTTTAAAAGAGAAGAATTGTGACAAAATAATAAACTATGCGGAATCTAATAAAAAATTATTTAAG GCTTCTGTAATGTATGCAATGAAGAAATATAATAATATTGATGAAGCAACAATCTATATAAAGAAAGAATTTAATAAAAT ATTCGAAATGTCTTTAGCATTTACACAAAAAAGTAATATGTTTAAACAAGCAACCGGAAAAATTGCCGGTGCTGTTTGTG CTTTACTAGTCGGAGCAATTAGTGTTGCGACTGCGGGAGCGGCTTTTTCTATCATAGTTGTACCGGCATCAATTTTTGCT GTCAGATATGCACCCGAACTTGGGGAAAAAATTGGAGGGTTAATTTTAAATAATGATAATGCAATAAAACTAGAACAAAG CAATATAGATAAGTTTATGAAAACATTACAAAATGATAAAGAAAGTCTTCTATCTCAAGAAAAAACAAAAAACATTAAAC AAAATATTAAAGTTTCTCCTTCTCAAATAAATGCTCAATTAACTAAGAAAGTGATTAATGAAAAATATAGATAG
Upstream 100 bases:
>100_bases CAAGAATATATATAAACTTTCAGTGAATCATGCTCCTAATCTTATTTATGCTAAATTGATATTATATATCAGAGAATTAG CCTCAAAATAAATTACTAAA
Downstream 100 bases:
>100_bases GGTATCGTAATTGCGAGTGACTGTAGATGTTGCCCGTATGGTTCGAAAGACTTACTCGATGTCATTCCTGCGAGGCATTG GCGTTATTCCATGGATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKCISRLKNYLGMRVINDDNFSV ALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFGDKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFK ASVMYAMKKYNNIDEATIYIKKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSPSQINAQLTKKVINEKYR
Sequences:
>Translated_317_residues MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKCISRLKNYLGMRVINDDNFSV ALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFGDKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFK ASVMYAMKKYNNIDEATIYIKKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSPSQINAQLTKKVINEKYR >Mature_317_residues MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKCISRLKNYLGMRVINDDNFSV ALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFGDKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFK ASVMYAMKKYNNIDEATIYIKKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSPSQINAQLTKKVINEKYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020180 - ProDom: PD214932 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35774; Mature: 35774
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKC CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHH ISRLKNYLGMRVINDDNFSVALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFG HHHHHHHHCEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC DKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFKASVMYAMKKYNNIDEATIYI CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEH KKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHH VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSP HHHCHHHHHHHCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SQINAQLTKKVINEKYR HHHHHHHHHHHHHCCCC >Mature Secondary Structure MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKC CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHH ISRLKNYLGMRVINDDNFSVALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFG HHHHHHHHCEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC DKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFKASVMYAMKKYNNIDEATIYI CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEH KKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHH VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSP HHHCHHHHHHHCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SQINAQLTKKVINEKYR HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]