| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826334
Identifier: 157826334
GI number: 157826334
Start: 1187482
End: 1188120
Strand: Reverse
Name: 157826334
Synonym: A1C_06615
Alternate gene names: NA
Gene position: 1188120-1187482 (Counterclockwise)
Preceding gene: 157826335
Following gene: 157826333
Centisome position: 96.51
GC content: 25.2
Gene sequence:
>639_bases ATGTTTGAAAAATATATTATGTATTTAAAGAATCTTATATTCTTTCAATTTATTATATATTTCTTCTTTATTTCCTTAAC TATTTGGATAATAAAAAATTGCCAACAAGAATACAGTAAATCTATTCTTGATAAACAAGTTTCACAAGAAAATCTAACAG AGGCAGTTTTAAAGCTTTATTCTGTAATTAACTCTAAAGAAGAAATATTAGAATCTTACAAAAAATATGTAGATTTAAGC CTTCCAAGTGATGTGAGTTGCTTAAATTATGAAAAACTAATTCCTAAAATAAAAAGCTTAAGCACTAAATATGATTTAGT AGAACCTATAGACGTATCTATAAGTTCAGTATTTTTTAAAAATAATGTTCAAGCGATTGAAGGAGGAGAGGGTGAAGCGA TTCATCTAAATAATTATAGCATAAATATCAAATATGCATGTGCAGATTTTGTAACTTTTTTAAAAATATTTTCTGAAATT TATTCTTATATGCCTCCTAATACTCTTATATCTTTTGTACGAGTGCGTAATGAAGAAGTGTTAACGCCCAAGAATATATA TAAACTTTCAGTGAATCATGCTCCTAATCTTATTTATGCTAAATTGATATTATATATCAGAGAATTAGCCTCAAAATAA
Upstream 100 bases:
>100_bases GTAGTTCTTATCGCAATGACGGAAAACCGAACAACTCAGGCAATGCCATGCGGGCATGACATAAGTCATGCAACAGCATT CATAACCCAAGGTAAAGATA
Downstream 100 bases:
>100_bases ATTACTAAAATGAATAATGCAATAGTACTTAATAACATAAATACTAATTTATTTAAAAAAGATATTGTTAATAATTTTGT CAATAATCTTACGCAATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MFEKYIMYLKNLIFFQFIIYFFFISLTIWIIKNCQQEYSKSILDKQVSQENLTEAVLKLYSVINSKEEILESYKKYVDLS LPSDVSCLNYEKLIPKIKSLSTKYDLVEPIDVSISSVFFKNNVQAIEGGEGEAIHLNNYSINIKYACADFVTFLKIFSEI YSYMPPNTLISFVRVRNEEVLTPKNIYKLSVNHAPNLIYAKLILYIRELASK
Sequences:
>Translated_212_residues MFEKYIMYLKNLIFFQFIIYFFFISLTIWIIKNCQQEYSKSILDKQVSQENLTEAVLKLYSVINSKEEILESYKKYVDLS LPSDVSCLNYEKLIPKIKSLSTKYDLVEPIDVSISSVFFKNNVQAIEGGEGEAIHLNNYSINIKYACADFVTFLKIFSEI YSYMPPNTLISFVRVRNEEVLTPKNIYKLSVNHAPNLIYAKLILYIRELASK >Mature_212_residues MFEKYIMYLKNLIFFQFIIYFFFISLTIWIIKNCQQEYSKSILDKQVSQENLTEAVLKLYSVINSKEEILESYKKYVDLS LPSDVSCLNYEKLIPKIKSLSTKYDLVEPIDVSISSVFFKNNVQAIEGGEGEAIHLNNYSINIKYACADFVTFLKIFSEI YSYMPPNTLISFVRVRNEEVLTPKNIYKLSVNHAPNLIYAKLILYIRELASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020135 - ProDom: PD209763 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24762; Mature: 24762
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEKYIMYLKNLIFFQFIIYFFFISLTIWIIKNCQQEYSKSILDKQVSQENLTEAVLKLY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVINSKEEILESYKKYVDLSLPSDVSCLNYEKLIPKIKSLSTKYDLVEPIDVSISSVFFK HHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH NNVQAIEGGEGEAIHLNNYSINIKYACADFVTFLKIFSEIYSYMPPNTLISFVRVRNEEV CCCCEEECCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC LTPKNIYKLSVNHAPNLIYAKLILYIRELASK CCCCHHEEEECCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFEKYIMYLKNLIFFQFIIYFFFISLTIWIIKNCQQEYSKSILDKQVSQENLTEAVLKLY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVINSKEEILESYKKYVDLSLPSDVSCLNYEKLIPKIKSLSTKYDLVEPIDVSISSVFFK HHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH NNVQAIEGGEGEAIHLNNYSINIKYACADFVTFLKIFSEIYSYMPPNTLISFVRVRNEEV CCCCEEECCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC LTPKNIYKLSVNHAPNLIYAKLILYIRELASK CCCCHHEEEECCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]