Click here to switch to the map view.

The map label for this gene is yigC [C]

Identifier: 157826282

GI number: 157826282

Start: 1136638

End: 1138116

Strand: Reverse

Name: yigC [C]

Synonym: A1C_06335

Alternate gene names: 157826282

Gene position: 1138116-1136638 (Counterclockwise)

Preceding gene: 157826283

Following gene: 157826281

Centisome position: 92.45

GC content: 36.11

Gene sequence:

>1479_bases
ATGAGCTTTAAAGATTTACCGGAGTTTTTAAAATTTTTAGAAAAAAATGGTGAGTTAAAGCGTATTTCTCTTGAGGTAAA
AACTGACCTAGAAATTACCGAGATTAGCAGAAGAGCATTAGCACAAGGCGGACCTGCATTACTTTTTGAAAATGTTATAA
AAGTTGATGGAAGTAAATCCACTATACCAGTCCTAACTAATCTTTATGCTAGTATCTACCGCATTTGCATGGGGCTTAAC
CTTAAATCACCCAAAGAATTAAGAGAACTTGGCGTTTTACTAGCATTACTTAAGCATCCACAACCTCCTGCATCTTTTAA
AGAAACATTATCAATGTTACCTCTTGCTAAGCGTATCTTTGCTATGTCTCCTAAAACAATATCAAAAGCAGCTTGTCATG
AAGTCATCATTGACAAACCGAATATCAATATATTACCGATTCAAAAATGTTGGCCTGAGGATATTTCGCCTTTAATTACT
TGGGGTATAGTAGTTACTAAAGGTCCAACAAAAGATAAGGTGGATAATTATAACCTTGGTATATATAGGATGCAAACAAT
AGCTCCTAATAAGCTATTGATGCGTTGGTTAAAGTTACGAGGCGGAGCAGAGCATCATAAACGTTGGAAAGAAGCAAAAA
AAGAGCCGTTTCCTGCTGCCATCGTGCTTGGGGCAAATCCAGCGGTAACTTTGGCAGCGGTTACGCCGATACCTGAGAAT
GTTTCAGAATATAATTTTGCAGGTTTACTCGGTAATGAAAAAATAGAGCTGGTACAATGTAAAACTATTGACTTCAAAGT
ACCGGCACATAGCGAAATAGTGTTAGAAGGCTATGTAAGTTTAGAGGAGTATTTGCCTGAAGGGCCTTTTGGGGATCATA
CCGGATATTATAATGATATTGAAGAATTTCCTGTATTTACCGTCACTGCAATAACAATGAAGAAAAATCCTATGTATTTA
AGTACTTATACGGGAAAACCACCTGATGAGCCATCAATCTTAGGTGAAGCATTAAATGAAATTTTTATTCCTATTTTGCA
ACAACAATTTCCGGAAATAGTAGATTTTTGGCTTCCACCTGAAGGTTGTTCATATAGGGTTGCAGTAGTATCGATTAAAA
AATCCTATCCCGGTCATGCTAAAAGAATAATGCTTGGTATTTGGTCTTACTTACGGCAATTTATGTATAGTAAGTTTATT
ATCATTGTAGATGATGATATTGATGTTCGTAATTGGCAAGAAGTGATTTGGGCAATAGCGACAAGAAGCGATCCAAAACG
TGATACGAGCTTTATAGATAATTCTCCGATAGATTATTTGGACTTTGCATCACCCAAGTCAGGTCTTGGTAGTAAAATGG
GAATAGATGCAACAGATAAAATATACCCTGAGACAAATAGAAAATGGGGTAAAAAAATAGAAATGAGTCAAGAAGTGATC
GACAAGGTTGATAGTATGTGGGATGGTTTAAAGATCTAG

Upstream 100 bases:

>100_bases
CGCTCCTCGCAACGACGAGTCTGGTATCCATGCCACAACGCAAACGCCATGTGGAAATGACATAATAAAGAGACCAAAAT
AAAACAAAAAAAATAGAACT

Downstream 100 bases:

>100_bases
GTTGTTCTATGTTCATTCCAGCGCGGAGACGGGAATGACATAGAGAGCCATACAAATCATATAACATTATCAGAACTAAA
CATGTATAACATATCGCACG

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MSFKDLPEFLKFLEKNGELKRISLEVKTDLEITEISRRALAQGGPALLFENVIKVDGSKSTIPVLTNLYASIYRICMGLN
LKSPKELRELGVLLALLKHPQPPASFKETLSMLPLAKRIFAMSPKTISKAACHEVIIDKPNINILPIQKCWPEDISPLIT
WGIVVTKGPTKDKVDNYNLGIYRMQTIAPNKLLMRWLKLRGGAEHHKRWKEAKKEPFPAAIVLGANPAVTLAAVTPIPEN
VSEYNFAGLLGNEKIELVQCKTIDFKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDIEEFPVFTVTAITMKKNPMYL
STYTGKPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPPEGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRQFMYSKFI
IIVDDDIDVRNWQEVIWAIATRSDPKRDTSFIDNSPIDYLDFASPKSGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVI
DKVDSMWDGLKI

Sequences:

>Translated_492_residues
MSFKDLPEFLKFLEKNGELKRISLEVKTDLEITEISRRALAQGGPALLFENVIKVDGSKSTIPVLTNLYASIYRICMGLN
LKSPKELRELGVLLALLKHPQPPASFKETLSMLPLAKRIFAMSPKTISKAACHEVIIDKPNINILPIQKCWPEDISPLIT
WGIVVTKGPTKDKVDNYNLGIYRMQTIAPNKLLMRWLKLRGGAEHHKRWKEAKKEPFPAAIVLGANPAVTLAAVTPIPEN
VSEYNFAGLLGNEKIELVQCKTIDFKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDIEEFPVFTVTAITMKKNPMYL
STYTGKPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPPEGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRQFMYSKFI
IIVDDDIDVRNWQEVIWAIATRSDPKRDTSFIDNSPIDYLDFASPKSGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVI
DKVDSMWDGLKI
>Mature_491_residues
SFKDLPEFLKFLEKNGELKRISLEVKTDLEITEISRRALAQGGPALLFENVIKVDGSKSTIPVLTNLYASIYRICMGLNL
KSPKELRELGVLLALLKHPQPPASFKETLSMLPLAKRIFAMSPKTISKAACHEVIIDKPNINILPIQKCWPEDISPLITW
GIVVTKGPTKDKVDNYNLGIYRMQTIAPNKLLMRWLKLRGGAEHHKRWKEAKKEPFPAAIVLGANPAVTLAAVTPIPENV
SEYNFAGLLGNEKIELVQCKTIDFKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDIEEFPVFTVTAITMKKNPMYLS
TYTGKPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPPEGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRQFMYSKFII
IVDDDIDVRNWQEVIWAIATRSDPKRDTSFIDNSPIDYLDFASPKSGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVID
KVDSMWDGLKI

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=495, Percent_Identity=55.959595959596, Blast_Score=587, Evalue=1e-169,
Organism=Saccharomyces cerevisiae, GI6320748, Length=511, Percent_Identity=27.3972602739726, Blast_Score=123, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55618; Mature: 55487

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKDLPEFLKFLEKNGELKRISLEVKTDLEITEISRRALAQGGPALLFENVIKVDGSKS
CCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
TIPVLTNLYASIYRICMGLNLKSPKELRELGVLLALLKHPQPPASFKETLSMLPLAKRIF
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AMSPKTISKAACHEVIIDKPNINILPIQKCWPEDISPLITWGIVVTKGPTKDKVDNYNLG
HCCCCHHHHHHHHHHEEECCCCCEEECHHCCCCCCHHHEEEEEEEECCCCCCCCCCCCCC
IYRMQTIAPNKLLMRWLKLRGGAEHHKRWKEAKKEPFPAAIVLGANPAVTLAAVTPIPEN
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCC
VSEYNFAGLLGNEKIELVQCKTIDFKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDI
CCCCCEEEECCCCCEEEEEEEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCH
EEFPVFTVTAITMKKNPMYLSTYTGKPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPP
HHCCEEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRQFMYSKFIIIVDDDIDVRNWQEVIWAIA
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
TRSDPKRDTSFIDNSPIDYLDFASPKSGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVI
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHH
DKVDSMWDGLKI
HHHHHHHCCCCC
>Mature Secondary Structure 
SFKDLPEFLKFLEKNGELKRISLEVKTDLEITEISRRALAQGGPALLFENVIKVDGSKS
CHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
TIPVLTNLYASIYRICMGLNLKSPKELRELGVLLALLKHPQPPASFKETLSMLPLAKRIF
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AMSPKTISKAACHEVIIDKPNINILPIQKCWPEDISPLITWGIVVTKGPTKDKVDNYNLG
HCCCCHHHHHHHHHHEEECCCCCEEECHHCCCCCCHHHEEEEEEEECCCCCCCCCCCCCC
IYRMQTIAPNKLLMRWLKLRGGAEHHKRWKEAKKEPFPAAIVLGANPAVTLAAVTPIPEN
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCC
VSEYNFAGLLGNEKIELVQCKTIDFKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDI
CCCCCEEEECCCCCEEEEEEEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCH
EEFPVFTVTAITMKKNPMYLSTYTGKPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPP
HHCCEEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRQFMYSKFIIIVDDDIDVRNWQEVIWAIA
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
TRSDPKRDTSFIDNSPIDYLDFASPKSGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVI
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHH
DKVDSMWDGLKI
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]