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The map label for this gene is ctpA [H]

Identifier: 157825437

GI number: 157825437

Start: 317290

End: 318639

Strand: Direct

Name: ctpA [H]

Synonym: A1C_01690

Alternate gene names: 157825437

Gene position: 317290-318639 (Clockwise)

Preceding gene: 157825436

Following gene: 157825438

Centisome position: 25.77

GC content: 33.26

Gene sequence:

>1350_bases
ATGTTATTACGCTTAATTATAACACTATTTTTTATTATAAATTCTATTTGTACATTTGCAGAAGCAGAAAAAGAAACTGA
AAATAAAATATCAAATCAGGAAGCTTATAAGCAATTTCAAGACGTATTTGAACGTATCGAAAAGGATTATGTACAGGTAC
CCGATAGGCAAAAAATGATAGATGAAGCAATTAACGGTATGTTAAGCTCTCTTGATCCTCATTCAAGCTATTATACTGAT
GAGGATTTAGAGGATATTTTTACTTTTACAAAAGGTGAATTCGGTGGAATCGGTGTTGAAATAATGTATGATAGCGGAGC
AATTAAGATAATATCGCCTATTGACGATTTACCGGCTTTTAAAGCAGGGCTTAAAGGCGGGGATTATATCGTAGGCGTGA
ATGACGAGTTAGTCTCTACGCTTGGTCCTAATAAAGCTATAAAAGAGATGCGTGGTATGCCTGGTACTAAGGTTAAATTG
TTGATAATTAAGGAAGAAGAGGCAAAACCGCAAGAGCTAGAGCTTACTCGTGAAATAGTAAAAATCAAGCCGATAAAAGC
ACATTTAGAAAAAAATAATATTGCATATATACGTATAACTACTTTTAATGAGTCAACAATTTCTGAGCTGAAAGCAGTAG
TAAAGAAGTTAAAAACTGAAAGTAAAGATAATCTTAAAGGTATAATTCTAGATTTACGTAATAATGCCGGTGGTATACTC
GATCAAGCTATTGCCGTTAGTGATTACTTTATTGATTCCGGTGTAATTGTAACAACAAAAGGTAGAACTACATCAAGTAA
TAGCGAGACTAAAGCAAATGAGTTTTCATTAAAAGCTCCCAAAGTACCTATGATAGTTTTAATAAACGGTAATTCTGCCT
CTGCCTCAGAAATAGTTGCTGGAGCTTTGCAAGATCATAAAAGAGCAATAATACTTGGCACTAGGTCTTTTGGTAAAGGA
TCAGTGCAGGCTTTAACGCAAATCAATTCTAGGGCTGCCGTAAAACTCACTATATCTAAATATTACACCCCAAGCGGTCG
TTCTATTCAGGCAGAGGGAATAGAGCCTGATATTTTAATTGAGCCGGCAAAAGTCGAATATCCTGAGGTAAAAAAAATAG
ATAAGCGTTTTTCAGAAAGTTCTTTAAAAAATTACTTAAAGAATGATAATGAAAAAAATAAAGATAGCAAAAAAGAAACA
AAAGCCAAAAATAATAAACAAGAAGAGAATGAATTATCGGAATTATACAAAAAAGATTATCAATTTGCTCGTGCTTATGA
TGTAATTACAGGGTTGATTCTTAATAAGAAGCTGGCAGCAAAAGAGCAAGTTAAACAAGAAGATAAGTAG

Upstream 100 bases:

>100_bases
ATTGTGGGGCATTGTCAACGTTGACCGCATGGCTCGAAAAACTTACTAGATGTCATTCCCTCCTTCGATGGCATGACATA
TTAACTTTTATTGGAGTATT

Downstream 100 bases:

>100_bases
AGAGAATAATTTCATTCCCGCGTAGGCGGGAATCTAGGGTAAAGTGAGATAAATCAAGCTTTTCAAATAAATTTTTTAAA
AAATTTTACAGTAAGGGCTT

Product: tail-specific protease precursor

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MLLRLIITLFFIINSICTFAEAEKETENKISNQEAYKQFQDVFERIEKDYVQVPDRQKMIDEAINGMLSSLDPHSSYYTD
EDLEDIFTFTKGEFGGIGVEIMYDSGAIKIISPIDDLPAFKAGLKGGDYIVGVNDELVSTLGPNKAIKEMRGMPGTKVKL
LIIKEEEAKPQELELTREIVKIKPIKAHLEKNNIAYIRITTFNESTISELKAVVKKLKTESKDNLKGIILDLRNNAGGIL
DQAIAVSDYFIDSGVIVTTKGRTTSSNSETKANEFSLKAPKVPMIVLINGNSASASEIVAGALQDHKRAIILGTRSFGKG
SVQALTQINSRAAVKLTISKYYTPSGRSIQAEGIEPDILIEPAKVEYPEVKKIDKRFSESSLKNYLKNDNEKNKDSKKET
KAKNNKQEENELSELYKKDYQFARAYDVITGLILNKKLAAKEQVKQEDK

Sequences:

>Translated_449_residues
MLLRLIITLFFIINSICTFAEAEKETENKISNQEAYKQFQDVFERIEKDYVQVPDRQKMIDEAINGMLSSLDPHSSYYTD
EDLEDIFTFTKGEFGGIGVEIMYDSGAIKIISPIDDLPAFKAGLKGGDYIVGVNDELVSTLGPNKAIKEMRGMPGTKVKL
LIIKEEEAKPQELELTREIVKIKPIKAHLEKNNIAYIRITTFNESTISELKAVVKKLKTESKDNLKGIILDLRNNAGGIL
DQAIAVSDYFIDSGVIVTTKGRTTSSNSETKANEFSLKAPKVPMIVLINGNSASASEIVAGALQDHKRAIILGTRSFGKG
SVQALTQINSRAAVKLTISKYYTPSGRSIQAEGIEPDILIEPAKVEYPEVKKIDKRFSESSLKNYLKNDNEKNKDSKKET
KAKNNKQEENELSELYKKDYQFARAYDVITGLILNKKLAAKEQVKQEDK
>Mature_449_residues
MLLRLIITLFFIINSICTFAEAEKETENKISNQEAYKQFQDVFERIEKDYVQVPDRQKMIDEAINGMLSSLDPHSSYYTD
EDLEDIFTFTKGEFGGIGVEIMYDSGAIKIISPIDDLPAFKAGLKGGDYIVGVNDELVSTLGPNKAIKEMRGMPGTKVKL
LIIKEEEAKPQELELTREIVKIKPIKAHLEKNNIAYIRITTFNESTISELKAVVKKLKTESKDNLKGIILDLRNNAGGIL
DQAIAVSDYFIDSGVIVTTKGRTTSSNSETKANEFSLKAPKVPMIVLINGNSASASEIVAGALQDHKRAIILGTRSFGKG
SVQALTQINSRAAVKLTISKYYTPSGRSIQAEGIEPDILIEPAKVEYPEVKKIDKRFSESSLKNYLKNDNEKNKDSKKET
KAKNNKQEENELSELYKKDYQFARAYDVITGLILNKKLAAKEQVKQEDK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=324, Percent_Identity=30.5555555555556, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 50150; Mature: 50150

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRLIITLFFIINSICTFAEAEKETENKISNQEAYKQFQDVFERIEKDYVQVPDRQKMI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DEAINGMLSSLDPHSSYYTDEDLEDIFTFTKGEFGGIGVEIMYDSGAIKIISPIDDLPAF
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCHHH
KAGLKGGDYIVGVNDELVSTLGPNKAIKEMRGMPGTKVKLLIIKEEEAKPQELELTREIV
HHCCCCCCEEEECCHHHHHHCCCCHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
KIKPIKAHLEKNNIAYIRITTFNESTISELKAVVKKLKTESKDNLKGIILDLRNNAGGIL
HHCHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH
DQAIAVSDYFIDSGVIVTTKGRTTSSNSETKANEFSLKAPKVPMIVLINGNSASASEIVA
HHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHH
GALQDHKRAIILGTRSFGKGSVQALTQINSRAAVKLTISKYYTPSGRSIQAEGIEPDILI
HHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCCEEEECCCCCCEEE
EPAKVEYPEVKKIDKRFSESSLKNYLKNDNEKNKDSKKETKAKNNKQEENELSELYKKDY
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
QFARAYDVITGLILNKKLAAKEQVKQEDK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLRLIITLFFIINSICTFAEAEKETENKISNQEAYKQFQDVFERIEKDYVQVPDRQKMI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DEAINGMLSSLDPHSSYYTDEDLEDIFTFTKGEFGGIGVEIMYDSGAIKIISPIDDLPAF
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCHHH
KAGLKGGDYIVGVNDELVSTLGPNKAIKEMRGMPGTKVKLLIIKEEEAKPQELELTREIV
HHCCCCCCEEEECCHHHHHHCCCCHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
KIKPIKAHLEKNNIAYIRITTFNESTISELKAVVKKLKTESKDNLKGIILDLRNNAGGIL
HHCHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH
DQAIAVSDYFIDSGVIVTTKGRTTSSNSETKANEFSLKAPKVPMIVLINGNSASASEIVA
HHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHH
GALQDHKRAIILGTRSFGKGSVQALTQINSRAAVKLTISKYYTPSGRSIQAEGIEPDILI
HHHHCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCCEEEECCCCCCEEE
EPAKVEYPEVKKIDKRFSESSLKNYLKNDNEKNKDSKKETKAKNNKQEENELSELYKKDY
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
QFARAYDVITGLILNKKLAAKEQVKQEDK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]