Click here to switch to the map view.

The map label for this gene is 157825263

Identifier: 157825263

GI number: 157825263

Start: 128643

End: 129836

Strand: Reverse

Name: 157825263

Synonym: A1C_00710

Alternate gene names: NA

Gene position: 129836-128643 (Counterclockwise)

Preceding gene: 157825288

Following gene: 157825262

Centisome position: 10.55

GC content: 31.83

Gene sequence:

>1194_bases
ATGTTAAGTAAACTAAATAAGCCTGCTTTATTTGCTTTAATATTTTATCCTATTTTTATTATATCTCTTGTAGTGAAATA
TTCGTTTAATTATGGGATAGGACGAACTGAAGTTATTTTTATAATTGCTAGTTATTATATTAATAATATTACCGTTGGGA
TTGGTTTGCATAGGTTATGGTCTCATAATGCATATAAAATAAATAAATGTGCCGAGTTTGTCTTAATTATGCTGTCTGCA
GGAACATTACAAGGACCGGCTTTATCTTGGGCATCGAATCATTATAAACATCATGCTAAAACAGATACAGATCAAGACCC
GCATAGCCCTTTAAAGTTTGATAGTAAGGTTTTAGGTTTTCTTTGGTCTCATATAGGATGGATGCTGGTCGGAAGCGGTA
GCTATAAGTCTATTGATCGCATTACTTGGGCTAAGCACGGGAAAAACAATTTATTAAAATGGCAGCTAAAATATTATTGG
CAAATAGCAGCTTTTATGAATATCGTCGTGCCTTTATTTATCGGTTACTTAGTCGATGGTACTATACAATCGGCATATGC
AGGATTTGTATTTATGGGACTTGGTAGATTCCTGCAGCAGCAAGCAACATTCTGTGTTAATTCTTTATGTCACTTTGCCG
GTAGTAAAAAATATTACAAAGGCACTGCCGGAGATATTTGGTGGATGGCATTATTCTTACTAGGTGAAAATTGGCACAAT
TACCATCATGCTTTCCCTTCAGATTATCGTAACGGTGCAAAATGGTATCATCTTGACGTTCACAAATGGATAATATTTTT
AATGAGTAAAATAGGTTTAGCTTCAGAACTTGAACGTACTACAAAAGTACGTATACAGGCAAAAATGCAAGAAACTTTAA
GCTATCTTAGTGAAAAACAAAAGCAAAAATTGACTTTAATGCAAGCTAAAATAGATCATTTATTAGAAAATCTATGCTTA
AAAATTAAAGAGCTAGAAGAATCATCGATTACTATTAAAGGACAATTTAAAAAATCTTTTGTGGAAATACAAGAATCACT
TAAAATTTTAGCAGAGCAAATAAGTTCTGCAACGCAAATAACAGAAAAACCTTCGGAAAAATTACTAAAAATAGTTAATA
AAAAAATTATTGATGCTGAACAATCTATTTATAGGCTGTATAATCAATTCAATACCTTAAAGGTATCTAGTTAG

Upstream 100 bases:

>100_bases
CTTTGTATTTATACATTCAGTATGTTAATATCAATATAATTATAATCGGATTTTATTCGTTACCAATCTAATTATTTTAT
AACTAAAAACTGTAAATTTT

Downstream 100 bases:

>100_bases
GTATTATTAAATAAGGATTAAATATCATTATTGCGAGCGAGTCTTGTTGCGTGGATCGGCAAGAACACTGTGTGTCGTTC
CCCGCGTAGGCGGGAATGCA

Product: Acyl-CoA desaturase 1

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Subfamily; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Protein; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty-Acid Desaturase-Like Protein; Eucaryotic Stearoyl-CoA 9-Desaturase; Stearoyl/Acyl-CoA Desaturase

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MLSKLNKPALFALIFYPIFIISLVVKYSFNYGIGRTEVIFIIASYYINNITVGIGLHRLWSHNAYKINKCAEFVLIMLSA
GTLQGPALSWASNHYKHHAKTDTDQDPHSPLKFDSKVLGFLWSHIGWMLVGSGSYKSIDRITWAKHGKNNLLKWQLKYYW
QIAAFMNIVVPLFIGYLVDGTIQSAYAGFVFMGLGRFLQQQATFCVNSLCHFAGSKKYYKGTAGDIWWMALFLLGENWHN
YHHAFPSDYRNGAKWYHLDVHKWIIFLMSKIGLASELERTTKVRIQAKMQETLSYLSEKQKQKLTLMQAKIDHLLENLCL
KIKELEESSITIKGQFKKSFVEIQESLKILAEQISSATQITEKPSEKLLKIVNKKIIDAEQSIYRLYNQFNTLKVSS

Sequences:

>Translated_397_residues
MLSKLNKPALFALIFYPIFIISLVVKYSFNYGIGRTEVIFIIASYYINNITVGIGLHRLWSHNAYKINKCAEFVLIMLSA
GTLQGPALSWASNHYKHHAKTDTDQDPHSPLKFDSKVLGFLWSHIGWMLVGSGSYKSIDRITWAKHGKNNLLKWQLKYYW
QIAAFMNIVVPLFIGYLVDGTIQSAYAGFVFMGLGRFLQQQATFCVNSLCHFAGSKKYYKGTAGDIWWMALFLLGENWHN
YHHAFPSDYRNGAKWYHLDVHKWIIFLMSKIGLASELERTTKVRIQAKMQETLSYLSEKQKQKLTLMQAKIDHLLENLCL
KIKELEESSITIKGQFKKSFVEIQESLKILAEQISSATQITEKPSEKLLKIVNKKIIDAEQSIYRLYNQFNTLKVSS
>Mature_397_residues
MLSKLNKPALFALIFYPIFIISLVVKYSFNYGIGRTEVIFIIASYYINNITVGIGLHRLWSHNAYKINKCAEFVLIMLSA
GTLQGPALSWASNHYKHHAKTDTDQDPHSPLKFDSKVLGFLWSHIGWMLVGSGSYKSIDRITWAKHGKNNLLKWQLKYYW
QIAAFMNIVVPLFIGYLVDGTIQSAYAGFVFMGLGRFLQQQATFCVNSLCHFAGSKKYYKGTAGDIWWMALFLLGENWHN
YHHAFPSDYRNGAKWYHLDVHKWIIFLMSKIGLASELERTTKVRIQAKMQETLSYLSEKQKQKLTLMQAKIDHLLENLCL
KIKELEESSITIKGQFKKSFVEIQESLKILAEQISSATQITEKPSEKLLKIVNKKIIDAEQSIYRLYNQFNTLKVSS

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=257, Percent_Identity=29.5719844357977, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI148596961, Length=251, Percent_Identity=29.4820717131474, Blast_Score=108, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17561774, Length=295, Percent_Identity=27.7966101694915, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17561776, Length=269, Percent_Identity=27.8810408921933, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17540878, Length=218, Percent_Identity=31.1926605504587, Blast_Score=108, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6321383, Length=255, Percent_Identity=33.3333333333333, Blast_Score=147, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24646295, Length=261, Percent_Identity=31.0344827586207, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24646500, Length=266, Percent_Identity=28.1954887218045, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24646303, Length=257, Percent_Identity=28.7937743190661, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646299, Length=257, Percent_Identity=28.7937743190661, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646305, Length=257, Percent_Identity=28.7937743190661, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646301, Length=257, Percent_Identity=28.7937743190661, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646297, Length=257, Percent_Identity=28.7937743190661, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21358573, Length=275, Percent_Identity=26.9090909090909, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24662393, Length=262, Percent_Identity=27.0992366412214, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21358571, Length=258, Percent_Identity=25.968992248062, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45734; Mature: 45734

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure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HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA