Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157825288

Identifier: 157825288

GI number: 157825288

Start: 159658

End: 159894

Strand: Reverse

Name: 157825288

Synonym: A1C_00850

Alternate gene names: NA

Gene position: 159894-159658 (Counterclockwise)

Preceding gene: 157825296

Following gene: 157825263

Centisome position: 12.99

GC content: 31.22

Gene sequence:

>237_bases
ATGTCAGAAGTAGTAGTAAAAGAACAATTAGAGCAATATATAAGCAAAATAGAAAGATTGGAACAAGAAAAAGCTGATTT
GTCTCAAGAAGTAAAAGATATTTTCCAAGATGCTTCTGCGCATGGTTTTGATGTTAAAGCTATGAAATCTATATTGAAAC
TAAAGAAATTGGATAAAGATAAACTTGCCGAGCAGGATGCTATGCTTGAACTTTATAGAGATACTTTAGGGATTTAG

Upstream 100 bases:

>100_bases
TGAGGATGCGAATCCTTAATAACATGCAAGAACAATTCTTGAAAGATAAGTAGCATATCTGTATTATATAGTAAATTCAA
AAAGGTTAAACGATTTTTTT

Downstream 100 bases:

>100_bases
TAGGTTTGCTTGCATATCGTCATTGGAATGGAAATGTAGAATTATCCTCAGCCGCCTATGTCATTCCAGCAAAGGCGGGA
ATTCAGAAAAAATACATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI

Sequences:

>Translated_78_residues
MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI
>Mature_77_residues
SEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI

Specific function: Unknown

COG id: COG3750

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0335 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018753 [H]

Pfam domain/function: PF10073 DUF2312 [H]

EC number: NA

Molecular weight: Translated: 9014; Mature: 8882

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH
KLAEQDAMLELYRDTLGI
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASAHGFDVKAMKSILKLKKLDKD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH
KLAEQDAMLELYRDTLGI
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA