| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is sam [H]
Identifier: 157825236
GI number: 157825236
Start: 97178
End: 98062
Strand: Direct
Name: sam [H]
Synonym: A1C_00575
Alternate gene names: 157825236
Gene position: 97178-98062 (Clockwise)
Preceding gene: 157825232
Following gene: 157825237
Centisome position: 7.89
GC content: 32.88
Gene sequence:
>885_bases ATGAATGATGCATTAAAAACATATTTAACAGGTATAGGTTGGTTTTTACTTAGTTTAGCAAGTAGTAGTGCCAATGATGT AATGTCTAAATATCTTGGGACTCGTTTACATAGCTTTGAAGTAGCTTTTTTTCGATTCTTTTTCAGTAGCATAGTTTTAC TACCTTTTGTTGTGTATTACAGTAAAAATACCTTAAAAACAAGTCGTCCTTTTGTACATATATTAAGAGGATTATTATTA TTTTTTGGTATGACTTCATGGACTTACGGTTTGACTATAGCTCCTGTTACTACCGCAACCGTTGTAAGTTTTTCTATCCC TTTATTTACTTTAACACTTGCCGTATTTTTTCTAAACGAAAATATTATTTGGCAAAGATGGGTAGTTACCGTAGTAGGAT TTATAGGGCTTGTTGTTACGCTTAAACCGCATGCCCAGGATTTTAACCCAGAAATTTTGTATTTTGTATTAGCGGCTATT TCATTTGCTATGCTTGATATTATTAATAAAAAATTCATAATAAAAGAATCAATGATTAGCATGCTATTTTATTCGGCAAT AGTAACTGCTATAGTGTCGCTACCTGTGGCATCGCAGTATTGGCTAACTCCTAGTGGTTTTGAATTAGCTTTATTATTCG TACTTGGTAGTAGCGGAAGCTTAATATTATTCTTTCTGCTTAAAGCTTTTTCCATGGTAGATGCAACCGCTACCGCTCCT TATAGATATTTAGAGCTCGTGATTTCGGCAATAACGGCATATTTCATATTTAACGAGTTTCCTGATAAAAATACACTTCA TGGAGCAGTAATAATAATTCCTGCCACCTTATTTATAATATACTCCGAAAAAAAAGCTATGAGTAGAAAACATGAATCGC AGTAA
Upstream 100 bases:
>100_bases TTTATTTATATATTTATACTATCGTTATAAATGATAGAATTCTTTTATGCTAAAAGTCAAGACATTTAAGTAACATTATA GAAATTATTGGAGCATATTA
Downstream 100 bases:
>100_bases GCTAGTATTTTCAAGCGGTATCGCTAACACTTTTGAATGGTATGATTATGTATTATTCGGTTATTTTGCACCCATAATAG GAGCAAAATTTTTCCCTAAT
Product: S-adenosylmethionine transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNDALKTYLTGIGWFLLSLASSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYYSKNTLKTSRPFVHILRGLLL FFGMTSWTYGLTIAPVTTATVVSFSIPLFTLTLAVFFLNENIIWQRWVVTVVGFIGLVVTLKPHAQDFNPEILYFVLAAI SFAMLDIINKKFIIKESMISMLFYSAIVTAIVSLPVASQYWLTPSGFELALLFVLGSSGSLILFFLLKAFSMVDATATAP YRYLELVISAITAYFIFNEFPDKNTLHGAVIIIPATLFIIYSEKKAMSRKHESQ
Sequences:
>Translated_294_residues MNDALKTYLTGIGWFLLSLASSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYYSKNTLKTSRPFVHILRGLLL FFGMTSWTYGLTIAPVTTATVVSFSIPLFTLTLAVFFLNENIIWQRWVVTVVGFIGLVVTLKPHAQDFNPEILYFVLAAI SFAMLDIINKKFIIKESMISMLFYSAIVTAIVSLPVASQYWLTPSGFELALLFVLGSSGSLILFFLLKAFSMVDATATAP YRYLELVISAITAYFIFNEFPDKNTLHGAVIIIPATLFIIYSEKKAMSRKHESQ >Mature_294_residues MNDALKTYLTGIGWFLLSLASSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYYSKNTLKTSRPFVHILRGLLL FFGMTSWTYGLTIAPVTTATVVSFSIPLFTLTLAVFFLNENIIWQRWVVTVVGFIGLVVTLKPHAQDFNPEILYFVLAAI SFAMLDIINKKFIIKESMISMLFYSAIVTAIVSLPVASQYWLTPSGFELALLFVLGSSGSLILFFLLKAFSMVDATATAP YRYLELVISAITAYFIFNEFPDKNTLHGAVIIIPATLFIIYSEKKAMSRKHESQ
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33066; Mature: 33066
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDALKTYLTGIGWFLLSLASSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKNTLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLTLAVFFLNE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC NIIWQRWVVTVVGFIGLVVTLKPHAQDFNPEILYFVLAAISFAMLDIINKKFIIKESMIS CHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLFYSAIVTAIVSLPVASQYWLTPSGFELALLFVLGSSGSLILFFLLKAFSMVDATATAP HHHHHHHHHHHHHCCCCCCCEECCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCH YRYLELVISAITAYFIFNEFPDKNTLHGAVIIIPATLFIIYSEKKAMSRKHESQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHEEECCHHHHHHHCCCC >Mature Secondary Structure MNDALKTYLTGIGWFLLSLASSSANDVMSKYLGTRLHSFEVAFFRFFFSSIVLLPFVVYY CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKNTLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLTLAVFFLNE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC NIIWQRWVVTVVGFIGLVVTLKPHAQDFNPEILYFVLAAISFAMLDIINKKFIIKESMIS CHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLFYSAIVTAIVSLPVASQYWLTPSGFELALLFVLGSSGSLILFFLLKAFSMVDATATAP HHHHHHHHHHHHHCCCCCCCEECCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCH YRYLELVISAITAYFIFNEFPDKNTLHGAVIIIPATLFIIYSEKKAMSRKHESQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHEEECCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]