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The map label for this gene is oxaA [H]

Identifier: 157825202

GI number: 157825202

Start: 63370

End: 65052

Strand: Direct

Name: oxaA [H]

Synonym: A1C_00405

Alternate gene names: 157825202

Gene position: 63370-65052 (Clockwise)

Preceding gene: 157825201

Following gene: 157825203

Centisome position: 5.15

GC content: 30.3

Gene sequence:

>1683_bases
ATGAATAATAATATCATTAATTTAATAGCCGCTATTGTACTGTCTTTAAGTATAATTTTCGGTTGGCAGTATTTTGTTAT
AAAACCTGAACAAAAAAAACAGCAACAGCAAATAGCAGTGCAGAAAGCAGCAAATTTAAAGAAACAACAGTTAAAAGCTT
TGGTAGAGCCTGCAACTGATATTGTTGTGCAAGAAGAAAGTCAAGTACAGCGTATTAAAATAGAATCTGAATCACTCACC
GGTTCTATTTCACTCAAAGGACTTAGATTTGATGATTTGATATTAAAAAAATATAAGCAAGATTTATCTAAAAATAGCTC
TGATGTTGTATTATTTTCACCTACTAATACAGAGCATTCTTATTTTGCCGAAATTGGATTAGTTAGTAATTTATCTAGTG
TAAAACTTCCTAATAACGATACAATATGGAGTAGTGACGGTGAAATATTAAGTCCTGAAAAACCCGTTAATTTATTTTGG
GTCAATGAAGACGGAGTTAAGTTTTTAGTTACTATTACCGTTGATAAAAACTATTTATTTACTATAGAACAAACCATAGT
TAATAATAGCGATAAAGAGCTTCCAATTCAATCATATGGCTTAATAAATCGTAAATATACTGCCGTAGAAAAAGCCGTAA
ATATACTACATCAAGGACCTATCGGTTGTATAGACGAGAATCTTAAAGAATATTCGTATGATGATATTAAAGATAAGAAA
AGCGAAAAATTTGCAGCAAGCAAAGTTGACTGGATAGGCATTACTGATAAATATTGGCTATCTGCTTTAATTCCCGATAA
ATCAAGTAATTATAGCTCAAATTTTAATTACGCTGTTAAACAAGGTATTGAAAAATATCAGGTAGATTTTATTTCACCGG
TGCAAATAATAAAACCCGGTGAAAATTTTGCCATTAAAAGCAGAATTTTTGCCGGAGCAAAAAAAGTAGACTTACTGGAT
CAATATGAAAAACAATATGATATTAAATTATTTGATAGAGCTATTGATTTCGGTTGGTTTTATATAATTACTAAGCCGGT
CTTCTACGCCATGAATTTTTTCTATGGCTATGTCGGTAATTTCGGTGTGAGTATATTAATTGTTACGGTCATAATTAAGC
TCTTAATGTTTACTTTAGCCAATAAATCTTATCGTTCGATGAAAAAAATAAAAAATTTACAACCGGAAATCGATAGGATA
AAAAATTTATACAGTGATGATAAAGCACGTTTAAATCAAGAAATTATGGCTTTATATAAAAAAGAAAAAGTAAATCCGGT
AGCGGGTTGTTTGCCTATACTTGTTCAAATTCCGGTATTTTTCTCTATCTATAAAGTATTATATGTAACTATTGAAATGC
GGCAAGCACAGTTCTATGGTTGGATTAAAGATTTATCCGCACCTGACCCTACTACTATTTTTAATTTATTCGGCTTATTA
CCGTTTTCACCACCGTCATTTTTAATGATTGGAGCATGGCCTATTTTAATGGCTATTACTATGTTCTTACAGCAAAAAAT
GAGTCCTGAACCTGCGGATCCGATGCAAGCTCAAGTAATGAAATTTATGCCGCTAATTTTTTTATTTATGTTTAGTAGTT
TTCCTGTTGGGCTTTTAATATACTGGTCTTGGAATAATATTCTATCCATAATTCAACAATATTATATTAATAAATTTAAT
TAA

Upstream 100 bases:

>100_bases
ATGGAAGCCGCACTTCATCTTGTATATATACTACTTGATTATTTTCTCTAAATGCTTTAGAACTTAAGGCTTTAAAAATA
TGAAAATTTAAGACCTAGGA

Downstream 100 bases:

>100_bases
TGAGAATAGATAAAAATTTACCTAATTATCTAACTATTGCTCGAATAATGGTAATTCCGGTTATTATACTGGCATTTTAT
ATAAATAATTCACTTGCACG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATDIVVQEESQVQRIKIESESLT
GSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHSYFAEIGLVSNLSSVKLPNNDTIWSSDGEILSPEKPVNLFW
VNEDGVKFLVTITVDKNYLFTIEQTIVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKK
SEKFAASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIKPGENFAIKSRIFAGAKKVDLLD
QYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRI
KNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLFGLL
PFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN

Sequences:

>Translated_560_residues
MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATDIVVQEESQVQRIKIESESLT
GSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHSYFAEIGLVSNLSSVKLPNNDTIWSSDGEILSPEKPVNLFW
VNEDGVKFLVTITVDKNYLFTIEQTIVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKK
SEKFAASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIKPGENFAIKSRIFAGAKKVDLLD
QYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRI
KNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLFGLL
PFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN
>Mature_560_residues
MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATDIVVQEESQVQRIKIESESLT
GSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHSYFAEIGLVSNLSSVKLPNNDTIWSSDGEILSPEKPVNLFW
VNEDGVKFLVTITVDKNYLFTIEQTIVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKK
SEKFAASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIKPGENFAIKSRIFAGAKKVDLLD
QYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGNFGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRI
KNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLFGLL
PFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLIYWSWNNILSIIQQYYINKFN

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=517, Percent_Identity=30.5609284332689, Blast_Score=248, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 64329; Mature: 64329

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATD
CCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IVVQEESQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHS
EEECCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCH
YFAEIGLVSNLSSVKLPNNDTIWSSDGEILSPEKPVNLFWVNEDGVKFLVTITVDKNYLF
HHHHHHHHHCCCCEECCCCCCEECCCCCEECCCCCEEEEEECCCCCEEEEEEEECCCEEE
TIEQTIVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKK
EEEHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH
SEKFAASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIKPG
HHHHHHCCCCEEECCHHHHHHEECCCCCCCCCCCCCHHHHHCHHHHHHCCCCCEEEECCC
ENFAIKSRIFAGAKKVDLLDQYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGN
CCCEEHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
FGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRIKNLYSDDKARLNQEIMALYK
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
KEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLFGLL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLI
CCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
YWSWNNILSIIQQYYINKFN
EECHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNNIINLIAAIVLSLSIIFGWQYFVIKPEQKKQQQQIAVQKAANLKKQQLKALVEPATD
CCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IVVQEESQVQRIKIESESLTGSISLKGLRFDDLILKKYKQDLSKNSSDVVLFSPTNTEHS
EEECCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCH
YFAEIGLVSNLSSVKLPNNDTIWSSDGEILSPEKPVNLFWVNEDGVKFLVTITVDKNYLF
HHHHHHHHHCCCCEECCCCCCEECCCCCEECCCCCEEEEEECCCCCEEEEEEEECCCEEE
TIEQTIVNNSDKELPIQSYGLINRKYTAVEKAVNILHQGPIGCIDENLKEYSYDDIKDKK
EEEHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH
SEKFAASKVDWIGITDKYWLSALIPDKSSNYSSNFNYAVKQGIEKYQVDFISPVQIIKPG
HHHHHHCCCCEEECCHHHHHHEECCCCCCCCCCCCCHHHHHCHHHHHHCCCCCEEEECCC
ENFAIKSRIFAGAKKVDLLDQYEKQYDIKLFDRAIDFGWFYIITKPVFYAMNFFYGYVGN
CCCEEHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
FGVSILIVTVIIKLLMFTLANKSYRSMKKIKNLQPEIDRIKNLYSDDKARLNQEIMALYK
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
KEKVNPVAGCLPILVQIPVFFSIYKVLYVTIEMRQAQFYGWIKDLSAPDPTTIFNLFGLL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PFSPPSFLMIGAWPILMAITMFLQQKMSPEPADPMQAQVMKFMPLIFLFMFSSFPVGLLI
CCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
YWSWNNILSIIQQYYINKFN
EECHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA