| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is pgsA [H]
Identifier: 157825203
GI number: 157825203
Start: 65052
End: 65597
Strand: Direct
Name: pgsA [H]
Synonym: A1C_00410
Alternate gene names: 157825203
Gene position: 65052-65597 (Clockwise)
Preceding gene: 157825202
Following gene: 157825204
Centisome position: 5.28
GC content: 29.85
Gene sequence:
>546_bases ATGAGAATAGATAAAAATTTACCTAATTATCTAACTATTGCTCGAATAATGGTAATTCCGGTTATTATACTGGCATTTTA TATAAATAATTCACTTGCACGTAAAATTGGAGCATTATTATTTGTTTTAGCTAGTATTACGGATTTTTTTGACGGTTATA TTGCAAGAAAATATAATTTAGTTACGAGTTTTGGCAAGATGTTTGATCCTATAGCAGATAAGATACTAGTGGGTTGCGTT ATTATAATGCTACTAAAAAAAGGTAACATAGATGAGATACCTTGTCTATTAATTTTAGCACGAGAATTTTTAGTTAGCGG TCTTCGGGAATTTTTAGCTTTGGTAAAGGTGAGTGTGCCTGTATCGAGACTCGCTAAGGTAAAAACGTTTTTACAAATGT TTGCTTTATCGATATTGATACTAGGATCCAAAGGTGCAGGCATTATTTATTTAGATATAGTAGGGGAAATAATTTTATGG ATTGCCGCTTTTTTAACAATCATTACAGGTTATTCTTATTTTAAAGCATGTAAGAAATATTTTTAA
Upstream 100 bases:
>100_bases TATTTATGTTTAGTAGTTTTCCTGTTGGGCTTTTAATATACTGGTCTTGGAATAATATTCTATCCATAATTCAACAATAT TATATTAATAAATTTAATTA
Downstream 100 bases:
>100_bases CATAGGAGACTTTTATGATATATGTAAAATATACAATTTTAGTGTTTATTATGGTGTTTAGTGTAAATCTTTACGCTACT CACAATGATATAATTGCCAA
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNLVTSFGKMFDPIADKILVGCV IIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVPVSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILW IAAFLTIITGYSYFKACKKYF
Sequences:
>Translated_181_residues MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNLVTSFGKMFDPIADKILVGCV IIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVPVSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILW IAAFLTIITGYSYFKACKKYF >Mature_181_residues MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNLVTSFGKMFDPIADKILVGCV IIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVPVSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILW IAAFLTIITGYSYFKACKKYF
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=177, Percent_Identity=35.0282485875706, Blast_Score=116, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6320059, Length=170, Percent_Identity=36.4705882352941, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20267; Mature: 20267
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTSFGKMFDPIADKILVGCVIIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILWIAAFLTIITGYSYFKACKKY HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC F C >Mature Secondary Structure MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTSFGKMFDPIADKILVGCVIIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILWIAAFLTIITGYSYFKACKKY HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA