Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

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The map label for this gene is pgsA [H]

Identifier: 157825203

GI number: 157825203

Start: 65052

End: 65597

Strand: Direct

Name: pgsA [H]

Synonym: A1C_00410

Alternate gene names: 157825203

Gene position: 65052-65597 (Clockwise)

Preceding gene: 157825202

Following gene: 157825204

Centisome position: 5.28

GC content: 29.85

Gene sequence:

>546_bases
ATGAGAATAGATAAAAATTTACCTAATTATCTAACTATTGCTCGAATAATGGTAATTCCGGTTATTATACTGGCATTTTA
TATAAATAATTCACTTGCACGTAAAATTGGAGCATTATTATTTGTTTTAGCTAGTATTACGGATTTTTTTGACGGTTATA
TTGCAAGAAAATATAATTTAGTTACGAGTTTTGGCAAGATGTTTGATCCTATAGCAGATAAGATACTAGTGGGTTGCGTT
ATTATAATGCTACTAAAAAAAGGTAACATAGATGAGATACCTTGTCTATTAATTTTAGCACGAGAATTTTTAGTTAGCGG
TCTTCGGGAATTTTTAGCTTTGGTAAAGGTGAGTGTGCCTGTATCGAGACTCGCTAAGGTAAAAACGTTTTTACAAATGT
TTGCTTTATCGATATTGATACTAGGATCCAAAGGTGCAGGCATTATTTATTTAGATATAGTAGGGGAAATAATTTTATGG
ATTGCCGCTTTTTTAACAATCATTACAGGTTATTCTTATTTTAAAGCATGTAAGAAATATTTTTAA

Upstream 100 bases:

>100_bases
TATTTATGTTTAGTAGTTTTCCTGTTGGGCTTTTAATATACTGGTCTTGGAATAATATTCTATCCATAATTCAACAATAT
TATATTAATAAATTTAATTA

Downstream 100 bases:

>100_bases
CATAGGAGACTTTTATGATATATGTAAAATATACAATTTTAGTGTTTATTATGGTGTTTAGTGTAAATCTTTACGCTACT
CACAATGATATAATTGCCAA

Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNLVTSFGKMFDPIADKILVGCV
IIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVPVSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILW
IAAFLTIITGYSYFKACKKYF

Sequences:

>Translated_181_residues
MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNLVTSFGKMFDPIADKILVGCV
IIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVPVSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILW
IAAFLTIITGYSYFKACKKYF
>Mature_181_residues
MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNLVTSFGKMFDPIADKILVGCV
IIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVPVSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILW
IAAFLTIITGYSYFKACKKYF

Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI1788220, Length=177, Percent_Identity=35.0282485875706, Blast_Score=116, Evalue=7e-28,
Organism=Saccharomyces cerevisiae, GI6320059, Length=170, Percent_Identity=36.4705882352941, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462
- InterPro:   IPR004570 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.5 [H]

Molecular weight: Translated: 20267; Mature: 20267

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTSFGKMFDPIADKILVGCVIIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILWIAAFLTIITGYSYFKACKKY
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure
MRIDKNLPNYLTIARIMVIPVIILAFYINNSLARKIGALLFVLASITDFFDGYIARKYNL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTSFGKMFDPIADKILVGCVIIMLLKKGNIDEIPCLLILAREFLVSGLREFLALVKVSVP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VSRLAKVKTFLQMFALSILILGSKGAGIIYLDIVGEIILWIAAFLTIITGYSYFKACKKY
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA