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The map label for this gene is yibP [H]

Identifier: 229593537

GI number: 229593537

Start: 5337576

End: 5338910

Strand: Direct

Name: yibP [H]

Synonym: Spro_4820

Alternate gene names: 229593537

Gene position: 5337576-5338910 (Clockwise)

Preceding gene: 157373051

Following gene: 157373053

Centisome position: 97.96

GC content: 58.5

Gene sequence:

>1335_bases
ATGAGGGAAAAGGCGTTTTTTGCACTATCAAGGGTAACCCGAAGCGCAAACGCAGGCAGCCAACCGCTGCCTGAACGCAC
CGCGCCAAGGAAGTTGACCACCATGTGCGCCAGCGTATTTTACGCTGGCGTCTTGTTGTTGCCGTTAGCCAGCCAGGCGG
CGGAAGACAACAAATCCCAACTCAAAGACATCCAGCAGAGCATCGCCGAGAAAGAAAAGGCGGTTAAACAGCAGCAGCAA
CAGCGCAGCTCACTGCAGGATCAGCTTAAGCAGCAAGAAAAAACCATCGCGCAGGCCAGCCGCCTGCTGCGTGATACCCA
GGGCACTTTGAGCCAGCTGGGGAAAGATATCTCCGGCCTGAACACCTCAATCGCCAAGCTGCAAAAACAGCAGTCAACCC
AGCAGGAAATCCTTGCCAAGCAACTCGATGCCGCCTTTAGGCAGGGCCAGCACAGCGCCGTCCAGTTGGTGCTTAGTGGT
GAAGAGAGCCAACGCAGCGAACGTATTTTGGCTTACTTCGGTTATCTGAACGAAGCGCGCCAGCAAACGATTGAAGAGCT
GAAACAAACCCGCGCCGAACTGGCCAAGCAAAAAACCACGCTGGTCGCCAAGCAAGGCCAACAGAAATCGCTGCTGGGCG
AGCAACAGACGCAGCAACAGAAGCTGGAGCAGGCACGCGGAGCGCGTAAGAAAACGCTGACCGCACTGGAAGCCTCGCTG
GAAAAAGATCAGCAACGTCTGGTGGAACTGCGTCAGAACGAAACCCGCATGCGCGACAAAATTGCCCGGGCCGAACGAGA
AGCCCGCGCCCGTGCGGAACGCGAAGCGCGTGAAGCCGCCAAGGTGCGCGAACAGGTTCGCGTCAAAGAACAGCAGGCGA
AGAAAACCGGCACCAGCTATAAACCAAGCGAAGCCGACCGTTCACTGATGGCCCGTACCGGCGGCCTCGGTCGACCAAAC
GGACAGGCCATATGGCCGGTGCGCGGCCGCACACTGCACGGTTTCGGCGAACAGCTGCAGGGCGAGCTACGCTGGAAAGG
CATGGTCATCGAGGCCAGAGAAGGCAGCGAAGTGAAAGCCATTGCCGATGGCCGCGTATTGCTGGCCGACTGGTTACAGG
GCTATGGCCTGGTGGTCGTCATCGAGCACGGTAAGGGCGACATGAGTCTGTATGGCTACAACCAAAGCGCGTTGGTCAAT
GTCGGGGCGCAGGTGCGTGCCGGTCAACCAATCGCCTTAGTGGGTACCAGCGGGGGCCAGGGAACGCCGTCGCTCTATTT
CGAAATTCGTCGCCAGGGTCAGGCCGTTAACCCACTGCCGTGGTTGGGAAGATAG

Upstream 100 bases:

>100_bases
GCTTTCGGACATCGCGCCAACCATGCTGGCGCTGATGGGAATGGAAATCCCGCAAGAGATGACTGGTAAGCCGCTGTTCA
TCGTGGAATAATCCTTCTCC

Downstream 100 bases:

>100_bases
ATTTGCGCTATATCAAAACCCGTACTGTCGTATTGATTGGCTGTCTGCTGCAGGTTTGTGCCGCGCAGGCAGGGAAGTTA
TCCATCGTTATCGATGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MREKAFFALSRVTRSANAGSQPLPERTAPRKLTTMCASVFYAGVLLLPLASQAAEDNKSQLKDIQQSIAEKEKAVKQQQQ
QRSSLQDQLKQQEKTIAQASRLLRDTQGTLSQLGKDISGLNTSIAKLQKQQSTQQEILAKQLDAAFRQGQHSAVQLVLSG
EESQRSERILAYFGYLNEARQQTIEELKQTRAELAKQKTTLVAKQGQQKSLLGEQQTQQQKLEQARGARKKTLTALEASL
EKDQQRLVELRQNETRMRDKIARAEREARARAEREAREAAKVREQVRVKEQQAKKTGTSYKPSEADRSLMARTGGLGRPN
GQAIWPVRGRTLHGFGEQLQGELRWKGMVIEAREGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVN
VGAQVRAGQPIALVGTSGGQGTPSLYFEIRRQGQAVNPLPWLGR

Sequences:

>Translated_444_residues
MREKAFFALSRVTRSANAGSQPLPERTAPRKLTTMCASVFYAGVLLLPLASQAAEDNKSQLKDIQQSIAEKEKAVKQQQQ
QRSSLQDQLKQQEKTIAQASRLLRDTQGTLSQLGKDISGLNTSIAKLQKQQSTQQEILAKQLDAAFRQGQHSAVQLVLSG
EESQRSERILAYFGYLNEARQQTIEELKQTRAELAKQKTTLVAKQGQQKSLLGEQQTQQQKLEQARGARKKTLTALEASL
EKDQQRLVELRQNETRMRDKIARAEREARARAEREAREAAKVREQVRVKEQQAKKTGTSYKPSEADRSLMARTGGLGRPN
GQAIWPVRGRTLHGFGEQLQGELRWKGMVIEAREGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVN
VGAQVRAGQPIALVGTSGGQGTPSLYFEIRRQGQAVNPLPWLGR
>Mature_444_residues
MREKAFFALSRVTRSANAGSQPLPERTAPRKLTTMCASVFYAGVLLLPLASQAAEDNKSQLKDIQQSIAEKEKAVKQQQQ
QRSSLQDQLKQQEKTIAQASRLLRDTQGTLSQLGKDISGLNTSIAKLQKQQSTQQEILAKQLDAAFRQGQHSAVQLVLSG
EESQRSERILAYFGYLNEARQQTIEELKQTRAELAKQKTTLVAKQGQQKSLLGEQQTQQQKLEQARGARKKTLTALEASL
EKDQQRLVELRQNETRMRDKIARAEREARARAEREAREAAKVREQVRVKEQQAKKTGTSYKPSEADRSLMARTGGLGRPN
GQAIWPVRGRTLHGFGEQLQGELRWKGMVIEAREGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVN
VGAQVRAGQPIALVGTSGGQGTPSLYFEIRRQGQAVNPLPWLGR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=421, Percent_Identity=66.0332541567696, Blast_Score=513, Evalue=1e-147,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=40.3361344537815, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI87082174, Length=120, Percent_Identity=32.5, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 49346; Mature: 49346

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKAFFALSRVTRSANAGSQPLPERTAPRKLTTMCASVFYAGVLLLPLASQAAEDNKSQ
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LKDIQQSIAEKEKAVKQQQQQRSSLQDQLKQQEKTIAQASRLLRDTQGTLSQLGKDISGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTSIAKLQKQQSTQQEILAKQLDAAFRQGQHSAVQLVLSGEESQRSERILAYFGYLNEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHH
QQTIEELKQTRAELAKQKTTLVAKQGQQKSLLGEQQTQQQKLEQARGARKKTLTALEASL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHH
EKDQQRLVELRQNETRMRDKIARAEREARARAEREAREAAKVREQVRVKEQQAKKTGTSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KPSEADRSLMARTGGLGRPNGQAIWPVRGRTLHGFGEQLQGELRWKGMVIEAREGSEVKA
CCCHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCEECEEEEECCCCCCEEE
IADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVNVGAQVRAGQPIALVGTSGGQ
ECCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHCCCCCEECCCCEEEEECCCCC
GTPSLYFEIRRQGQAVNPLPWLGR
CCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MREKAFFALSRVTRSANAGSQPLPERTAPRKLTTMCASVFYAGVLLLPLASQAAEDNKSQ
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LKDIQQSIAEKEKAVKQQQQQRSSLQDQLKQQEKTIAQASRLLRDTQGTLSQLGKDISGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTSIAKLQKQQSTQQEILAKQLDAAFRQGQHSAVQLVLSGEESQRSERILAYFGYLNEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHH
QQTIEELKQTRAELAKQKTTLVAKQGQQKSLLGEQQTQQQKLEQARGARKKTLTALEASL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHH
EKDQQRLVELRQNETRMRDKIARAEREARARAEREAREAAKVREQVRVKEQQAKKTGTSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KPSEADRSLMARTGGLGRPNGQAIWPVRGRTLHGFGEQLQGELRWKGMVIEAREGSEVKA
CCCHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCEECEEEEECCCCCCEEE
IADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVNVGAQVRAGQPIALVGTSGGQ
ECCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHCCCCCEECCCCEEEEECCCCC
GTPSLYFEIRRQGQAVNPLPWLGR
CCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]