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The map label for this gene is yibQ [H]

Identifier: 157373053

GI number: 157373053

Start: 5338913

End: 5339869

Strand: Direct

Name: yibQ [H]

Synonym: Spro_4821

Alternate gene names: 157373053

Gene position: 5338913-5339869 (Clockwise)

Preceding gene: 229593537

Following gene: 157373054

Centisome position: 97.98

GC content: 58.73

Gene sequence:

>957_bases
TTGCGCTATATCAAAACCCGTACTGTCGTATTGATTGGCTGTCTGCTGCAGGTTTGTGCCGCGCAGGCAGGGAAGTTATC
CATCGTTATCGATGACGTGGGTTATCGCCCGCATGAGGAAGGTGCCGTGCTGCAGATGCCGACGGCTATCTCCGTCGCCG
TACTGCCCAACGCCCCTCATGCCCATTTAATGGCCACCCGCGCCCACAGTCAGGGCCGCGAAGTGCTGATCCATATGCCG
ATGGCACCGCTCAGCAAGCAACCACTGGAACGCGATACGTTACAGCCCTCCATGAGCAGCGAAGAGATCCAGCGCATTAT
CCGCAATGCGGTCAATAATGTGCCCTATGCGGTGGGTATGAATAACCACATGGGCAGCGCCATGACCTCCAGCCTGCCGG
CCATGCAGAAAGTGATGCAGGCGCTCGACAGCTACCAGCTCTATTTCCTCGACAGCATGACCATTGGCAATAGCCAGGCC
ACCCGCGCTGCCGCCGGCACACACGTGAAGGTGATCAAGCGGAAGGTATTCCTGGACGATACCGCCAACGAAGCCGACAT
CCGCCGTCAGTTCAACCGCGCGGTCGAGCTGGCACGACGCAATGGTTCCGCCATCGCCATTGGCCACCCGCGCCCGGCAA
CGGTAAGAGTGTTGCAGCAAATGCTGCCGACGCTGCCGGCCGATATCGTACTGGTAAAACCGAGCTCCCTGCTGAATGAA
CCGCAAGGTAGCAGCGGGGGCAGTTACGTCCCACCAGTGGCCAAACCGCCGAAACCGCAGCCGAAGAACCCGTTCACCGG
CGGTATCAAGCAGTGCAAGGTCAAGTTGCCGAAAGAAAAAGTCAACGCCGGCAAGGTGATGAGCGTGATCGGCGAAAGCG
TAGCGCAGTCACCCGCCGTGACATTTATTCAACGCCAGTGGCAACGCTGGACAGGGCCGGAACAAACCAAGTCATAA

Upstream 100 bases:

>100_bases
TAGTGGGTACCAGCGGGGGCCAGGGAACGCCGTCGCTCTATTTCGAAATTCGTCGCCAGGGTCAGGCCGTTAACCCACTG
CCGTGGTTGGGAAGATAGAT

Downstream 100 bases:

>100_bases
GTTTCCCGCTAAAACAGGCGACAAGCAGAGGCTCTGCTTGTCGCTTTTCTTTTTCTGAAATCCCCTCACGCCGCCCGTAA
CCTCGATCATCACACCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRYIKTRTVVLIGCLLQVCAAQAGKLSIVIDDVGYRPHEEGAVLQMPTAISVAVLPNAPHAHLMATRAHSQGREVLIHMP
MAPLSKQPLERDTLQPSMSSEEIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPAMQKVMQALDSYQLYFLDSMTIGNSQA
TRAAAGTHVKVIKRKVFLDDTANEADIRRQFNRAVELARRNGSAIAIGHPRPATVRVLQQMLPTLPADIVLVKPSSLLNE
PQGSSGGSYVPPVAKPPKPQPKNPFTGGIKQCKVKLPKEKVNAGKVMSVIGESVAQSPAVTFIQRQWQRWTGPEQTKS

Sequences:

>Translated_318_residues
MRYIKTRTVVLIGCLLQVCAAQAGKLSIVIDDVGYRPHEEGAVLQMPTAISVAVLPNAPHAHLMATRAHSQGREVLIHMP
MAPLSKQPLERDTLQPSMSSEEIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPAMQKVMQALDSYQLYFLDSMTIGNSQA
TRAAAGTHVKVIKRKVFLDDTANEADIRRQFNRAVELARRNGSAIAIGHPRPATVRVLQQMLPTLPADIVLVKPSSLLNE
PQGSSGGSYVPPVAKPPKPQPKNPFTGGIKQCKVKLPKEKVNAGKVMSVIGESVAQSPAVTFIQRQWQRWTGPEQTKS
>Mature_318_residues
MRYIKTRTVVLIGCLLQVCAAQAGKLSIVIDDVGYRPHEEGAVLQMPTAISVAVLPNAPHAHLMATRAHSQGREVLIHMP
MAPLSKQPLERDTLQPSMSSEEIQRIIRNAVNNVPYAVGMNNHMGSAMTSSLPAMQKVMQALDSYQLYFLDSMTIGNSQA
TRAAAGTHVKVIKRKVFLDDTANEADIRRQFNRAVELARRNGSAIAIGHPRPATVRVLQQMLPTLPADIVLVKPSSLLNE
PQGSSGGSYVPPVAKPPKPQPKNPFTGGIKQCKVKLPKEKVNAGKVMSVIGESVAQSPAVTFIQRQWQRWTGPEQTKS

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=296, Percent_Identity=67.5675675675676, Blast_Score=395, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 34643; Mature: 34643

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYIKTRTVVLIGCLLQVCAAQAGKLSIVIDDVGYRPHEEGAVLQMPTAISVAVLPNAPH
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCC
AHLMATRAHSQGREVLIHMPMAPLSKQPLERDTLQPSMSSEEIQRIIRNAVNNVPYAVGM
HHHEEHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
NNHMGSAMTSSLPAMQKVMQALDSYQLYFLDSMTIGNSQATRAAAGTHVKVIKRKVFLDD
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHCC
TANEADIRRQFNRAVELARRNGSAIAIGHPRPATVRVLQQMLPTLPADIVLVKPSSLLNE
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEECCHHHHCC
PQGSSGGSYVPPVAKPPKPQPKNPFTGGIKQCKVKLPKEKVNAGKVMSVIGESVAQSPAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCHHHCCHHHHHHHHHHHHHCCHHH
TFIQRQWQRWTGPEQTKS
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRYIKTRTVVLIGCLLQVCAAQAGKLSIVIDDVGYRPHEEGAVLQMPTAISVAVLPNAPH
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCC
AHLMATRAHSQGREVLIHMPMAPLSKQPLERDTLQPSMSSEEIQRIIRNAVNNVPYAVGM
HHHEEHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEC
NNHMGSAMTSSLPAMQKVMQALDSYQLYFLDSMTIGNSQATRAAAGTHVKVIKRKVFLDD
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHCC
TANEADIRRQFNRAVELARRNGSAIAIGHPRPATVRVLQQMLPTLPADIVLVKPSSLLNE
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEECCHHHHCC
PQGSSGGSYVPPVAKPPKPQPKNPFTGGIKQCKVKLPKEKVNAGKVMSVIGESVAQSPAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCHHHCCHHHHHHHHHHHHHCCHHH
TFIQRQWQRWTGPEQTKS
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]