| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yggL [H]
Identifier: 157372275
GI number: 157372275
Start: 4478737
End: 4479063
Strand: Reverse
Name: yggL [H]
Synonym: Spro_4041
Alternate gene names: 157372275
Gene position: 4479063-4478737 (Counterclockwise)
Preceding gene: 157372276
Following gene: 157372274
Centisome position: 82.2
GC content: 52.6
Gene sequence:
>327_bases ATGGCTAAGAACCGCAGTCGTCGTTTACGTAAAAAGTTACACATTGAAGAGTTTCAGGAGCTGGGTTTCTCCGTAGCATG GCGTTTTGCCGAAGGCACCGCGGTTGAAGATATCGACAGCACGCAGGACGCTTTCATCGACGAAGTGATCGAGCCGAACG GCATGGCGTTTGACGGCAGTGGCTACCTGCAGTGGGAAGGTTTGATCTGCCTGCAGACTATCGGTCACTGTACCGACGAA CAGCGTGAACTGGTCAAAAAATGGCTGGAAGCGCGCAAGCTGACCGACGTTAAGGTTAGCGATCTGTTCGATATCTGGTG GGACTGA
Upstream 100 bases:
>100_bases ACGTGCCGCGTCCGGATTCACGACCACTGACAAAATTTGAATTACGCGGCCAGCGTCTGGGACATGGCGTTTGGGATTTG ATGTTTGAGAGGAAAGAATA
Downstream 100 bases:
>100_bases TTTTCCCCGCCTGATTTTGCGCTGTATTCATTGATTGTAAGGTGCCTTAACGGCACCTTTATTTTGTCCGGAGTGTGACC GCGGTGGTAACTACATTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MAKNRSRRLRKKLHIEEFQELGFSVAWRFAEGTAVEDIDSTQDAFIDEVIEPNGMAFDGSGYLQWEGLICLQTIGHCTDE QRELVKKWLEARKLTDVKVSDLFDIWWD
Sequences:
>Translated_108_residues MAKNRSRRLRKKLHIEEFQELGFSVAWRFAEGTAVEDIDSTQDAFIDEVIEPNGMAFDGSGYLQWEGLICLQTIGHCTDE QRELVKKWLEARKLTDVKVSDLFDIWWD >Mature_107_residues AKNRSRRLRKKLHIEEFQELGFSVAWRFAEGTAVEDIDSTQDAFIDEVIEPNGMAFDGSGYLQWEGLICLQTIGHCTDEQ RELVKKWLEARKLTDVKVSDLFDIWWD
Specific function: Unknown
COG id: COG3171
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0341 [H]
Homologues:
Organism=Escherichia coli, GI87082190, Length=108, Percent_Identity=73.1481481481482, Blast_Score=172, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007416 [H]
Pfam domain/function: PF04320 DUF469 [H]
EC number: NA
Molecular weight: Translated: 12622; Mature: 12491
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNRSRRLRKKLHIEEFQELGFSVAWRFAEGTAVEDIDSTQDAFIDEVIEPNGMAFDGS CCCCHHHHHHHHHCHHHHHHCCHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCC GYLQWEGLICLQTIGHCTDEQRELVKKWLEARKLTDVKVSDLFDIWWD CEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure AKNRSRRLRKKLHIEEFQELGFSVAWRFAEGTAVEDIDSTQDAFIDEVIEPNGMAFDGS CCCHHHHHHHHHCHHHHHHCCHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCC GYLQWEGLICLQTIGHCTDEQRELVKKWLEARKLTDVKVSDLFDIWWD CEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2001994 [H]