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The map label for this gene is trmB

Identifier: 157372276

GI number: 157372276

Start: 4479063

End: 4479782

Strand: Reverse

Name: trmB

Synonym: Spro_4042

Alternate gene names: 157372276

Gene position: 4479782-4479063 (Counterclockwise)

Preceding gene: 157372280

Following gene: 157372275

Centisome position: 82.22

GC content: 56.25

Gene sequence:

>720_bases
ATGATTAATGACGTCATCTCCCCAGAATTTGATGAGAACGGCCGTGCGATGCGCCGTATCCGCAGTTTTGTTCGCCGCCA
GGGGCGGTTGACCAAAGGCCAGCAGCACGCGCTGGACAACTATTGGCCGGTGATGGGCGTGGAGTATCAGGCTGAACCTG
TCGATATCACCGCACTGTTTGGGCGCGATGCGCCGACCGTGCTGGAGATCGGTTTTGGCATGGGCGCCTCGCTGGTGACC
ATGGCGGGCCATAACCCGCAGCAGAATTTCTTGGGGATTGAAGTACACTCGCCGGGCGTGGGCGCCTGCCTGGCCGACGC
TACCGAAGCGGAGCTGAGCAACCTGCGCGTGATGTGTCACGATGCGGTTGAGGTGCTGGAGAATATGATCCCGGATGGTT
CGCTGGACATGGTGCAGCTGTTCTTCCCCGATCCGTGGCATAAAGCGCGCCACAACAAACGTCGCATCGTACAGACGCCG
TTTGTTGAACTGGTGCGGCGCAAATTGAAAGTCGGCGGCGTCTTCCATATGGCCACCGACTGGCAGCCTTACGCAGAACA
TATGTTAGAGGTTATGAACGGGATCTCAGGCTATCGTAATCTTTCCAGCGATAATGATTACGTGCCGCGTCCGGATTCAC
GACCACTGACAAAATTTGAATTACGCGGCCAGCGTCTGGGACATGGCGTTTGGGATTTGATGTTTGAGAGGAAAGAATAA

Upstream 100 bases:

>100_bases
ACGTCGCACGGCAGGTACACAAGATGAACACTTGCTAAACCAATGTATCTTTGCATAATGCGCGTTTCCCTAATTGGCAG
CCAAACAGACAGAAAGCACT

Downstream 100 bases:

>100_bases
TGGCTAAGAACCGCAGTCGTCGTTTACGTAAAAAGTTACACATTGAAGAGTTTCAGGAGCTGGGTTTCTCCGTAGCATGG
CGTTTTGCCGAAGGCACCGC

Product: tRNA (guanine-N(7)-)-methyltransferase

Products: NA

Alternate protein names: tRNA(m7G46)-methyltransferase

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MINDVISPEFDENGRAMRRIRSFVRRQGRLTKGQQHALDNYWPVMGVEYQAEPVDITALFGRDAPTVLEIGFGMGASLVT
MAGHNPQQNFLGIEVHSPGVGACLADATEAELSNLRVMCHDAVEVLENMIPDGSLDMVQLFFPDPWHKARHNKRRIVQTP
FVELVRRKLKVGGVFHMATDWQPYAEHMLEVMNGISGYRNLSSDNDYVPRPDSRPLTKFELRGQRLGHGVWDLMFERKE

Sequences:

>Translated_239_residues
MINDVISPEFDENGRAMRRIRSFVRRQGRLTKGQQHALDNYWPVMGVEYQAEPVDITALFGRDAPTVLEIGFGMGASLVT
MAGHNPQQNFLGIEVHSPGVGACLADATEAELSNLRVMCHDAVEVLENMIPDGSLDMVQLFFPDPWHKARHNKRRIVQTP
FVELVRRKLKVGGVFHMATDWQPYAEHMLEVMNGISGYRNLSSDNDYVPRPDSRPLTKFELRGQRLGHGVWDLMFERKE
>Mature_239_residues
MINDVISPEFDENGRAMRRIRSFVRRQGRLTKGQQHALDNYWPVMGVEYQAEPVDITALFGRDAPTVLEIGFGMGASLVT
MAGHNPQQNFLGIEVHSPGVGACLADATEAELSNLRVMCHDAVEVLENMIPDGSLDMVQLFFPDPWHKARHNKRRIVQTP
FVELVRRKLKVGGVFHMATDWQPYAEHMLEVMNGISGYRNLSSDNDYVPRPDSRPLTKFELRGQRLGHGVWDLMFERKE

Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA

COG id: COG0220

COG function: function code R; Predicted S-adenosylmethionine-dependent methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. TrmB family

Homologues:

Organism=Escherichia coli, GI1789330, Length=237, Percent_Identity=80.168776371308, Blast_Score=403, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRMB_SERP5 (A8GJ47)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001480265.1
- ProteinModelPortal:   A8GJ47
- SMR:   A8GJ47
- STRING:   A8GJ47
- GeneID:   5605794
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_4042
- eggNOG:   COG0220
- HOGENOM:   HBG322782
- OMA:   TDWEEYA
- ProtClustDB:   PRK00121
- BioCyc:   SPRO399741:SPRO_4042-MONOMER
- HAMAP:   MF_01057
- InterPro:   IPR003358
- PANTHER:   PTHR23417:SF1
- TIGRFAMs:   TIGR00091

Pfam domain/function: PF02390 Methyltransf_4

EC number: =2.1.1.33

Molecular weight: Translated: 27172; Mature: 27172

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: BINDING 69-69 BINDING 94-94 BINDING 121-121 BINDING 144-144 BINDING 148-148 BINDING 180-180

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINDVISPEFDENGRAMRRIRSFVRRQGRLTKGQQHALDNYWPVMGVEYQAEPVDITALF
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEECCCEEEEEEE
GRDAPTVLEIGFGMGASLVTMAGHNPQQNFLGIEVHSPGVGACLADATEAELSNLRVMCH
CCCCCEEEEECCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
DAVEVLENMIPDGSLDMVQLFFPDPWHKARHNKRRIVQTPFVELVRRKLKVGGVFHMATD
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCEECCHHHHHHHHHHHHCCEEEECCC
WQPYAEHMLEVMNGISGYRNLSSDNDYVPRPDSRPLTKFELRGQRLGHGVWDLMFERKE
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MINDVISPEFDENGRAMRRIRSFVRRQGRLTKGQQHALDNYWPVMGVEYQAEPVDITALF
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEECCCEEEEEEE
GRDAPTVLEIGFGMGASLVTMAGHNPQQNFLGIEVHSPGVGACLADATEAELSNLRVMCH
CCCCCEEEEECCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
DAVEVLENMIPDGSLDMVQLFFPDPWHKARHNKRRIVQTPFVELVRRKLKVGGVFHMATD
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCEECCHHHHHHHHHHHHCCEEEECCC
WQPYAEHMLEVMNGISGYRNLSSDNDYVPRPDSRPLTKFELRGQRLGHGVWDLMFERKE
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA