| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is lip2 [H]
Identifier: 157371092
GI number: 157371092
Start: 3130886
End: 3131860
Strand: Direct
Name: lip2 [H]
Synonym: Spro_2852
Alternate gene names: 157371092
Gene position: 3130886-3131860 (Clockwise)
Preceding gene: 157371090
Following gene: 157371099
Centisome position: 57.46
GC content: 58.77
Gene sequence:
>975_bases ATGTCCAAGAAAACTGTAGATCCCACCCAACCGGCCGCACAGCATGATATCCGCACCTTTCTGGATGCGTTGAATGCCGG CGGTGGCAAGCCGATGGAACAAATGAAACCGAAAGAGGCGCGCAAAGTGCTGGAGGGCGCGCAGCGTAGCGTCGAAGTGC CACTGCACGAGGTCGAAATCAGCGAGAAAACCATTCATGTCGAGGGGCAGGATATCCTGCTGCACATTGTGCGACCGGCC AAGGTCAAGGAAACACTGCCGGTATTTATGTTCTTCCACGGCGGTGGCTGGGTGCTGGGCGACTTCCCTACCCATGAGCG GCTGGTGCGTGACTTGGTTTACAGCTCAGGTGCGGCAGCGGTGTTCGTCAACTATACCCCGTCACCGGAGGCTCATTACC CAACCGCCATCAATCAGGCCTATGCCGCCACCGAATGGGTGGCCGAATACGGCGAGAAAATCAACGTTGACGGCTCGCGG CTGGCAGTGGTCGGCAACAGCGTCGGCGGTAATATGGCGGCGGTGGTCAGCCTGATGGCCAAAGAAAAAGGCACCCCGGC GCTGCGCACGCAAATCCTGCTGTGGCCGGTAACGCACGCCAGCTTTGATACCGACTCTTACCACCAATTCGCCGAAGGCC ACTTCCTGACCCGCAACATGATGAAATGGTTCTGGGACAACTACACCACCGATAAAGCGCAGCGTAAGGAGATCTACGCC TCACCGCTCAATGCCACGCTGGAACAGCTAAAAGGCCTGCCGCCGGCACTGGTGCAGACCGCCGAACTGGACGTGCTGCG TGACGAGGGTGAAGCCTATGCCCGGCTGCTGAATGCCGCCGGGGTAGAGGTCACTTCCACTCGCTACAATGGACTGATCC ACGATTACGGTCTGCTAAACCCTATCGCTCATGTGCCGGCGGTGCATTCCGCCATTCATCAGGCCGGGCGGGCGCTCAAA CATTATCTGGCCTAG
Upstream 100 bases:
>100_bases CGTGGCTTGGCCCGCCTTTTCTCAACGTGCTGTCGGGCCAGCAAACGGCAGCCATTCAACTACACTGTGATCTCGACCGA AAAACGCTTGAGGAGCCATG
Downstream 100 bases:
>100_bases GCTAATCGGCATAATGGCAGGCTACCCGATGCCCTGCTGACACCGTCCGTAATGCCGGGGCCTGTTCCCGGCACTGCGCG GTGGCCTGCGGACAACGGGT
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSKKTVDPTQPAAQHDIRTFLDALNAGGGKPMEQMKPKEARKVLEGAQRSVEVPLHEVEISEKTIHVEGQDILLHIVRPA KVKETLPVFMFFHGGGWVLGDFPTHERLVRDLVYSSGAAAVFVNYTPSPEAHYPTAINQAYAATEWVAEYGEKINVDGSR LAVVGNSVGGNMAAVVSLMAKEKGTPALRTQILLWPVTHASFDTDSYHQFAEGHFLTRNMMKWFWDNYTTDKAQRKEIYA SPLNATLEQLKGLPPALVQTAELDVLRDEGEAYARLLNAAGVEVTSTRYNGLIHDYGLLNPIAHVPAVHSAIHQAGRALK HYLA
Sequences:
>Translated_324_residues MSKKTVDPTQPAAQHDIRTFLDALNAGGGKPMEQMKPKEARKVLEGAQRSVEVPLHEVEISEKTIHVEGQDILLHIVRPA KVKETLPVFMFFHGGGWVLGDFPTHERLVRDLVYSSGAAAVFVNYTPSPEAHYPTAINQAYAATEWVAEYGEKINVDGSR LAVVGNSVGGNMAAVVSLMAKEKGTPALRTQILLWPVTHASFDTDSYHQFAEGHFLTRNMMKWFWDNYTTDKAQRKEIYA SPLNATLEQLKGLPPALVQTAELDVLRDEGEAYARLLNAAGVEVTSTRYNGLIHDYGLLNPIAHVPAVHSAIHQAGRALK HYLA >Mature_323_residues SKKTVDPTQPAAQHDIRTFLDALNAGGGKPMEQMKPKEARKVLEGAQRSVEVPLHEVEISEKTIHVEGQDILLHIVRPAK VKETLPVFMFFHGGGWVLGDFPTHERLVRDLVYSSGAAAVFVNYTPSPEAHYPTAINQAYAATEWVAEYGEKINVDGSRL AVVGNSVGGNMAAVVSLMAKEKGTPALRTQILLWPVTHASFDTDSYHQFAEGHFLTRNMMKWFWDNYTTDKAQRKEIYAS PLNATLEQLKGLPPALVQTAELDVLRDEGEAYARLLNAAGVEVTSTRYNGLIHDYGLLNPIAHVPAVHSAIHQAGRALKH YLA
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68299767, Length=282, Percent_Identity=26.9503546099291, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI21328446, Length=139, Percent_Identity=28.7769784172662, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI157041239, Length=144, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI68051721, Length=158, Percent_Identity=29.746835443038, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1786682, Length=213, Percent_Identity=26.7605633802817, Blast_Score=89, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17567059, Length=266, Percent_Identity=26.6917293233083, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71996133, Length=159, Percent_Identity=30.8176100628931, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI72001146, Length=124, Percent_Identity=31.4516129032258, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17540028, Length=139, Percent_Identity=30.9352517985612, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 35741; Mature: 35610
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTVDPTQPAAQHDIRTFLDALNAGGGKPMEQMKPKEARKVLEGAQRSVEVPLHEVEI CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHEEE SEKTIHVEGQDILLHIVRPAKVKETLPVFMFFHGGGWVLGDFPTHERLVRDLVYSSGAAA CCCEEEECCCEEEEEEECCHHHHHCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCCCCE VFVNYTPSPEAHYPTAINQAYAATEWVAEYGEKINVDGSRLAVVGNSVGGNMAAVVSLMA EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCHHHHHHHHHH KEKGTPALRTQILLWPVTHASFDTDSYHQFAEGHFLTRNMMKWFWDNYTTDKAQRKEIYA HCCCCHHHHEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHH SPLNATLEQLKGLPPALVQTAELDVLRDEGEAYARLLNAAGVEVTSTRYNGLIHDYGLLN CHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECHHHCCCCHHHHHHH PIAHVPAVHSAIHQAGRALKHYLA HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKKTVDPTQPAAQHDIRTFLDALNAGGGKPMEQMKPKEARKVLEGAQRSVEVPLHEVEI CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHEEE SEKTIHVEGQDILLHIVRPAKVKETLPVFMFFHGGGWVLGDFPTHERLVRDLVYSSGAAA CCCEEEECCCEEEEEEECCHHHHHCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCCCCE VFVNYTPSPEAHYPTAINQAYAATEWVAEYGEKINVDGSRLAVVGNSVGGNMAAVVSLMA EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCCCCHHHHHHHHHH KEKGTPALRTQILLWPVTHASFDTDSYHQFAEGHFLTRNMMKWFWDNYTTDKAQRKEIYA HCCCCHHHHEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHH SPLNATLEQLKGLPPALVQTAELDVLRDEGEAYARLLNAAGVEVTSTRYNGLIHDYGLLN CHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECHHHCCCCHHHHHHH PIAHVPAVHSAIHQAGRALKHYLA HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]