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The map label for this gene is cydA [H]

Identifier: 157371099

GI number: 157371099

Start: 3139166

End: 3140566

Strand: Direct

Name: cydA [H]

Synonym: Spro_2859

Alternate gene names: 157371099

Gene position: 3139166-3140566 (Clockwise)

Preceding gene: 157371092

Following gene: 157371100

Centisome position: 57.61

GC content: 58.96

Gene sequence:

>1401_bases
ATGCTGGGTCTTGATGCACTGGAACTTGCCAGAATACAGTTCGCCTTCACCGTTTCTTTCCATATTATTTTCCCTGCAAT
TACCATCGGCCTGGCCAGTTATCTGGCGGTGCTGGAAGGTTTGTGGCTGAAAACGCGAAATGAAACCTACCGCGATCTCT
ATCATTTCTGGTCAAAAATTTTCGCCGTCAACTTCGGCATGGGCGTGGTGTCCGGCCTGGTGATGGCCTATCAGTTCGGC
ACCAACTGGAGCTTTTTCTCCGAGTTTGCCGGCAGTATCACCGGCCCGTTGCTGACCTATGAAGTGCTGACCGCCTTCTT
CCTGGAGGCCGGTTTCCTTGGGGTAATGCTGTTCGGCTGGAACCGCGTCGGCCCTGGGCTGCACTTCTTTGCTACCTGCA
TGGTGGCGCTGGGGACGCTGATTTCCACCTTCTGGATCCTGGCGTCCAACAGCTGGATGCAGACCCCACAGGGCCACGAA
ATCATTAACGGCCAGGTGGTACCGGTCGACTGGCTCAAAGTGATTTTCAACCCGTCATTCCCGTACCGGCTGTTGCACAT
GTCGACCGCCGCCTTCCTGTCCTCGGCGTTCTTTGTCAGTGCCTCCGCCGCCTGGCATTTGCTGCGCGGGCGTGACACTC
CGGCGATGCGCAAAATGCTGTCGATGGCAATGTGGATGGCGCTGATTGTCGCGCCGATACAGGCGATGATCGGCGATGCG
CACGGCCTGAATACGCTGAAATATCAACCGGCAAAAATCGCAGCCATCGAAGGCCACTGGGAAAATCCGCCGGGTGAAGC
CACCCCGCTGATCCTGTTCGGCTGGCCGGATATGCAACGCGAGGAAACCCGCTTCAAGCTTGAAGTGCCTTACCTGGGCA
GCCTGATCCTGACCCACAGCCTGACCGAGCAGGTACCGGCGCTGAAATCCTTCCCGCCGGAGGACCGCCCGAACTCCACC
GTTGTGTTCTGGTCGTTCCGCATCATGGTGGCGCTGGGCATGCTGATGATCCTCGCCGGGGTCTGGAGCCTGTGGCTGCG
CTGGCGCGGCGGGTTATATCAGTCCCGGCCGTTCCTCTACTTCATTTTGTGGATGGGGCCTTCCGGGCTGCTGGCCCTGC
TGGCGGGTTGGTTCACGACCGAGATTGGGCGTCAGCCATGGGTGGTCTATGGCCTGCTGCGCACCAGGGATGCGGTCTCC
GCACACGGCGACCTGCACATGAGCATCAGCCTGCTGGCGTTTATCATCGTCTACTGTTCGGTGTTCGGCGTGGGCTACTC
CTACATGATGCGGCTGATCCGCAAAGGGCCGCAGCAGCATGAAGTGCATGAAGATGACACCGAAGGCCGACCGGCACGTC
CGCTGTCTGCGGTGAAAGAAACTCTGGATGACAGGAGCTGA

Upstream 100 bases:

>100_bases
ATAGTTAATGTACTCCGTGCTTAACTTGGAGCCAAGCTTTCGATAGAAAAATTACCGCTATACTGAAGAGGCCATTTTAT
GTACAACCCAAGGAGGCGCC

Downstream 100 bases:

>100_bases
GCATGGGCATTGATCTTCCGCTGATTTGGTTTGTGATCATCGTGTTCAGCACCATGATGTACGTGGTAATGGACGGCTTT
GATTTGGGTATCGGCATCCT

Product: cytochrome bd ubiquinol oxidase subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MLGLDALELARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKTRNETYRDLYHFWSKIFAVNFGMGVVSGLVMAYQFG
TNWSFFSEFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWNRVGPGLHFFATCMVALGTLISTFWILASNSWMQTPQGHE
IINGQVVPVDWLKVIFNPSFPYRLLHMSTAAFLSSAFFVSASAAWHLLRGRDTPAMRKMLSMAMWMALIVAPIQAMIGDA
HGLNTLKYQPAKIAAIEGHWENPPGEATPLILFGWPDMQREETRFKLEVPYLGSLILTHSLTEQVPALKSFPPEDRPNST
VVFWSFRIMVALGMLMILAGVWSLWLRWRGGLYQSRPFLYFILWMGPSGLLALLAGWFTTEIGRQPWVVYGLLRTRDAVS
AHGDLHMSISLLAFIIVYCSVFGVGYSYMMRLIRKGPQQHEVHEDDTEGRPARPLSAVKETLDDRS

Sequences:

>Translated_466_residues
MLGLDALELARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKTRNETYRDLYHFWSKIFAVNFGMGVVSGLVMAYQFG
TNWSFFSEFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWNRVGPGLHFFATCMVALGTLISTFWILASNSWMQTPQGHE
IINGQVVPVDWLKVIFNPSFPYRLLHMSTAAFLSSAFFVSASAAWHLLRGRDTPAMRKMLSMAMWMALIVAPIQAMIGDA
HGLNTLKYQPAKIAAIEGHWENPPGEATPLILFGWPDMQREETRFKLEVPYLGSLILTHSLTEQVPALKSFPPEDRPNST
VVFWSFRIMVALGMLMILAGVWSLWLRWRGGLYQSRPFLYFILWMGPSGLLALLAGWFTTEIGRQPWVVYGLLRTRDAVS
AHGDLHMSISLLAFIIVYCSVFGVGYSYMMRLIRKGPQQHEVHEDDTEGRPARPLSAVKETLDDRS
>Mature_466_residues
MLGLDALELARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKTRNETYRDLYHFWSKIFAVNFGMGVVSGLVMAYQFG
TNWSFFSEFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWNRVGPGLHFFATCMVALGTLISTFWILASNSWMQTPQGHE
IINGQVVPVDWLKVIFNPSFPYRLLHMSTAAFLSSAFFVSASAAWHLLRGRDTPAMRKMLSMAMWMALIVAPIQAMIGDA
HGLNTLKYQPAKIAAIEGHWENPPGEATPLILFGWPDMQREETRFKLEVPYLGSLILTHSLTEQVPALKSFPPEDRPNST
VVFWSFRIMVALGMLMILAGVWSLWLRWRGGLYQSRPFLYFILWMGPSGLLALLAGWFTTEIGRQPWVVYGLLRTRDAVS
AHGDLHMSISLLAFIIVYCSVFGVGYSYMMRLIRKGPQQHEVHEDDTEGRPARPLSAVKETLDDRS

Specific function: Cytochrome D Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At Low Aeration. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=318, Percent_Identity=38.3647798742138, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI87081779, Length=310, Percent_Identity=36.4516129032258, Blast_Score=228, Evalue=8e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 52474; Mature: 52474

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLDALELARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKTRNETYRDLYHFWSKI
CCCCCHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FAVNFGMGVVSGLVMAYQFGTNWSFFSEFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGW
HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
NRVGPGLHFFATCMVALGTLISTFWILASNSWMQTPQGHEIINGQVVPVDWLKVIFNPSF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEECHHHHHHHHHCCCC
PYRLLHMSTAAFLSSAFFVSASAAWHLLRGRDTPAMRKMLSMAMWMALIVAPIQAMIGDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
HGLNTLKYQPAKIAAIEGHWENPPGEATPLILFGWPDMQREETRFKLEVPYLGSLILTHS
CCCCCCEECCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHH
LTEQVPALKSFPPEDRPNSTVVFWSFRIMVALGMLMILAGVWSLWLRWRGGLYQSRPFLY
HHHHCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
FILWMGPSGLLALLAGWFTTEIGRQPWVVYGLLRTRDAVSAHGDLHMSISLLAFIIVYCS
EEEEECCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VFGVGYSYMMRLIRKGPQQHEVHEDDTEGRPARPLSAVKETLDDRS
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MLGLDALELARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKTRNETYRDLYHFWSKI
CCCCCHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FAVNFGMGVVSGLVMAYQFGTNWSFFSEFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGW
HHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
NRVGPGLHFFATCMVALGTLISTFWILASNSWMQTPQGHEIINGQVVPVDWLKVIFNPSF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEECHHHHHHHHHCCCC
PYRLLHMSTAAFLSSAFFVSASAAWHLLRGRDTPAMRKMLSMAMWMALIVAPIQAMIGDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
HGLNTLKYQPAKIAAIEGHWENPPGEATPLILFGWPDMQREETRFKLEVPYLGSLILTHS
CCCCCCEECCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHH
LTEQVPALKSFPPEDRPNSTVVFWSFRIMVALGMLMILAGVWSLWLRWRGGLYQSRPFLY
HHHHCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
FILWMGPSGLLALLAGWFTTEIGRQPWVVYGLLRTRDAVSAHGDLHMSISLLAFIIVYCS
EEEEECCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VFGVGYSYMMRLIRKGPQQHEVHEDDTEGRPARPLSAVKETLDDRS
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]