| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is adrB [H]
Identifier: 157371051
GI number: 157371051
Start: 3090810
End: 3092426
Strand: Direct
Name: adrB [H]
Synonym: Spro_2811
Alternate gene names: 157371051
Gene position: 3090810-3092426 (Clockwise)
Preceding gene: 157371050
Following gene: 157371053
Centisome position: 56.72
GC content: 55.84
Gene sequence:
>1617_bases ATGTTGATGACCCAACTTGCCGTGAGCAAATACCGCTATTACCGTTGGCTACTGGCCGGGGCGGTCGGGTTGGCTATTCT GCTGTTATCGCTCTACACCCGTTATTATCAAGAGATTGGCACTATTGAACAAAACCGGCAGGTGCTCGCGACCCGCACCG TCGCCAAGATTAACGATCTGCTGACACCGGCAAAGCAACAGGCCGAGCGTTCCATGCCACTGCTGGGCTCCACCTGTGAA GAGGTGATGCCAACGCTGCGTTTTCGCGCTGCGCAAAACCAGGCTCTGCGGGCAATGCTGTTGGTTAAGGACGGGGTTAT TTACTGTTCCAGCCTGTTTGGCACCCGTAAGTACCTTTTCAGCACTATTTTGCCCAGCGTAGCAAACGATGGCGCGAAGC TGGTATTGCGCCCTTCGCTCTCTGTCGCCAAAGGCGTGCCGACCCTGATCATGTGGACTCCCGCGCAGCCGGATAACAAC AGTAACGGCGTGTTGCACGTGTTCAATATTGAGCTATTGGCGAACTTCCTGCTGGAACCTCAGGAACCCTACGCGCAGCG AGTAGTGCTGAACGTCGGCAACTACAGCCTGGAGTATGGGCGTCGGGAAATCCTGCGCAGCGATACCCTGACCACTGACC TGCGCTATACCGCGAAATCCACTCGGTATCCGTTCTCTATTTCACTGTTCGGCCCGCAGGCCAGCATGCTGGCGCTGGCG GCGCTGCCGCGCCATATCCCGCTGTCGTTGTTGATCAGTCTGCTGGCGGCCTATGTGGTGTATCTGCTCACCGCTAATCG CATGAGCCTGTCGTACCACATTGGTCATGCCATTTCCCGCCGCGAATTCCGTGTTTACTGTCAGCCCATCATCAATGCTG AAACCGGCCGCTGTGTCGGGGTTGAAATGCTGCTGCGCTGGAAAAACAAACGACAGGGCTGGATTTCCCCCGACGTGTTT ATCCCGCTGGCGGAACAGCATGGCTTGATCATCGCTCTGACCCGTTACCTGATGAGCACCGTGGTGGAAAACCTGCAGTT GTTCCCGCCACGCCCGTCGTTTTATATCAGCATCAACGTCGCGGCCGAGCATTTCAACGGGGTGACCATTATCGATGATA TCCGCCGTCTGTGGCTTCCCGCGCATCCTATGCCTTCGCTGATGCTTGAGTTGACCGAACGTACCGCCCTGTCGGAAATT CAGTATGAACAAATCAAAACGCTGAAGGAAATGGGCATCATGTTGGCTATCGACGACTTTGGCACCGGGCACAGTTCACT CAGTTACCTGAAAAAACTCAGCCCTGACGTGTTGAAAATCGACCGGGGTTTCACCGCGGCCATAGGTACCGATGCGATTA ACGCCACCGTCACCGATACCATCATTACCCTGGCACATCGCCTGAAGCTGAAACTGGTGGCGGAAGGGGTAGAAACCGCC GAACAGGCGGATTATCTGCGTTCGCGCGATGTGAACGCGTTGCAGGGGTTCTATTTCGCCAAACCGATGCCAATCAATGT ATTCCCACTGTGGTTACAGCAGTATGAGTCGCGGTTGCGGGCGGTGAATCAGCGGGAGGAACGGCGGATGGAGCAGGAAA GCAAGCCGGAGGCGTGA
Upstream 100 bases:
>100_bases TCACTCTTGTATAACGACAGGCTAGAATTAGCCAAGTATCATTCAGGGCAGTTTTGCCTGACGGTGATTCAGGGCTGGCT TACCGAACAAGGATTTAGCG
Downstream 100 bases:
>100_bases TGCCTCCGGCCCGTAGGTTACTGGTGTTCCTCGTCGTGAGGTTCAACTTTGGTAATACGCACCAGTTCAATGCGGTACTC GGACACGGCAACGACTTCGA
Product: EAL domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MLMTQLAVSKYRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDLLTPAKQQAERSMPLLGSTCE EVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLFSTILPSVANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNN SNGVLHVFNIELLANFLLEPQEPYAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALA ALPRHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVGVEMLLRWKNKRQGWISPDVF IPLAEQHGLIIALTRYLMSTVVENLQLFPPRPSFYISINVAAEHFNGVTIIDDIRRLWLPAHPMPSLMLELTERTALSEI QYEQIKTLKEMGIMLAIDDFGTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETA EQADYLRSRDVNALQGFYFAKPMPINVFPLWLQQYESRLRAVNQREERRMEQESKPEA
Sequences:
>Translated_538_residues MLMTQLAVSKYRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDLLTPAKQQAERSMPLLGSTCE EVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLFSTILPSVANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNN SNGVLHVFNIELLANFLLEPQEPYAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALA ALPRHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVGVEMLLRWKNKRQGWISPDVF IPLAEQHGLIIALTRYLMSTVVENLQLFPPRPSFYISINVAAEHFNGVTIIDDIRRLWLPAHPMPSLMLELTERTALSEI QYEQIKTLKEMGIMLAIDDFGTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETA EQADYLRSRDVNALQGFYFAKPMPINVFPLWLQQYESRLRAVNQREERRMEQESKPEA >Mature_538_residues MLMTQLAVSKYRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDLLTPAKQQAERSMPLLGSTCE EVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLFSTILPSVANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNN SNGVLHVFNIELLANFLLEPQEPYAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALA ALPRHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVGVEMLLRWKNKRQGWISPDVF IPLAEQHGLIIALTRYLMSTVVENLQLFPPRPSFYISINVAAEHFNGVTIIDDIRRLWLPAHPMPSLMLELTERTALSEI QYEQIKTLKEMGIMLAIDDFGTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETA EQADYLRSRDVNALQGFYFAKPMPINVFPLWLQQYESRLRAVNQREERRMEQESKPEA
Specific function: May serve as a negative regulator of cellulose synthesis (as has been suggested for S.typhimurium); over-expression inhibits cell aggregation in strains able to produce adhesive curli fimbriae. Cyclic-di-GMP is a second messenger which controls cell surfa
COG id: COG2200
COG function: function code T; FOG: EAL domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 EAL domain [H]
Homologues:
Organism=Escherichia coli, GI87081980, Length=512, Percent_Identity=43.5546875, Blast_Score=416, Evalue=1e-117, Organism=Escherichia coli, GI1788502, Length=462, Percent_Identity=32.6839826839827, Blast_Score=241, Evalue=1e-64, Organism=Escherichia coli, GI87081845, Length=460, Percent_Identity=31.9565217391304, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1790496, Length=256, Percent_Identity=37.109375, Blast_Score=167, Evalue=2e-42, Organism=Escherichia coli, GI87081743, Length=273, Percent_Identity=38.0952380952381, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI1786507, Length=239, Percent_Identity=37.6569037656904, Blast_Score=155, Evalue=7e-39, Organism=Escherichia coli, GI87081921, Length=259, Percent_Identity=32.8185328185328, Blast_Score=138, Evalue=1e-33, Organism=Escherichia coli, GI1787541, Length=254, Percent_Identity=30.7086614173228, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI226510982, Length=250, Percent_Identity=30.4, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1787055, Length=254, Percent_Identity=32.6771653543307, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI1788849, Length=248, Percent_Identity=29.4354838709677, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI87082096, Length=235, Percent_Identity=32.3404255319149, Blast_Score=102, Evalue=9e-23, Organism=Escherichia coli, GI1787410, Length=117, Percent_Identity=32.4786324786325, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001633 [H]
Pfam domain/function: PF00563 EAL [H]
EC number: =3.1.4.52 [H]
Molecular weight: Translated: 60831; Mature: 60831
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50883 EAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMTQLAVSKYRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH LTPAKQQAERSMPLLGSTCEEVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLF HCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH STILPSVANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNNSNGVLHVFNIELLANFLLEP HHHHHHHCCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHCCC QEPYAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALA CCCHHHEEEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHH ALPRHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVG HCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHEEEEEECCCCCCCCCHH VEMLLRWKNKRQGWISPDVFIPLAEQHGLIIALTRYLMSTVVENLQLFPPRPSFYISINV HHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCEECCCCCCEEEEEEE AAEHFNGVTIIDDIRRLWLPAHPMPSLMLELTERTALSEIQYEQIKTLKEMGIMLAIDDF EEHHCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC GTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETA CCCHHHHHHHHHCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EQADYLRSRDVNALQGFYFAKPMPINVFPLWLQQYESRLRAVNQREERRMEQESKPEA HHHHHHHHCCCHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLMTQLAVSKYRYYRWLLAGAVGLAILLLSLYTRYYQEIGTIEQNRQVLATRTVAKINDL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH LTPAKQQAERSMPLLGSTCEEVMPTLRFRAAQNQALRAMLLVKDGVIYCSSLFGTRKYLF HCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH STILPSVANDGAKLVLRPSLSVAKGVPTLIMWTPAQPDNNSNGVLHVFNIELLANFLLEP HHHHHHHCCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHCCC QEPYAQRVVLNVGNYSLEYGRREILRSDTLTTDLRYTAKSTRYPFSISLFGPQASMLALA CCCHHHEEEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHH ALPRHIPLSLLISLLAAYVVYLLTANRMSLSYHIGHAISRREFRVYCQPIINAETGRCVG HCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHEEEEEECCCCCCCCCHH VEMLLRWKNKRQGWISPDVFIPLAEQHGLIIALTRYLMSTVVENLQLFPPRPSFYISINV HHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCEECCCCCCEEEEEEE AAEHFNGVTIIDDIRRLWLPAHPMPSLMLELTERTALSEIQYEQIKTLKEMGIMLAIDDF EEHHCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC GTGHSSLSYLKKLSPDVLKIDRGFTAAIGTDAINATVTDTIITLAHRLKLKLVAEGVETA CCCHHHHHHHHHCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EQADYLRSRDVNALQGFYFAKPMPINVFPLWLQQYESRLRAVNQREERRMEQESKPEA HHHHHHHHCCCHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]