| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ycgN [C]
Identifier: 157370991
GI number: 157370991
Start: 3032589
End: 3033035
Strand: Reverse
Name: ycgN [C]
Synonym: Spro_2751
Alternate gene names: 157370991
Gene position: 3033035-3032589 (Counterclockwise)
Preceding gene: 157370993
Following gene: 157370988
Centisome position: 55.66
GC content: 51.68
Gene sequence:
>447_bases ATGTCACAAACCCCTTTTTGGCAACAAAAAACGCTGGCGGAAATGTCAGAACAAGAGTGGGAATCGCTGTGCGACGGTTG TGGGCAATGCTGTCTGAATAAGCTGATCGACGAAGATACCGACGAGATTTATTTCACCAACGTAGCCTGTGACCAGTTGA ATATTAAATCGTGCCAGTGCCGCAACTATGAACGTCGCTTTGAGCTGGAAGAAGACTGCATCAAGTTGACGCGTGAGAAC CTCACGACGTTTGACTGGTTGCCACCGACCTGCGCATATCGTCTGATTGGCGAAGGCAAACCGTTATTCTCCTGGCACCC ACTGGTTAGCGGTTCCAAGGCGGCGATGCACGGTGAGCGCATTACGGTGCGGCATATTGCGGTACGTGAAAGTGAGGTGG TGGACTGGCAGGACCACATCATGAACAAACCAAGCTGGGCGCGATAA
Upstream 100 bases:
>100_bases TTGTGTTTTCAGCCTTTCCATTTGGTTGGGATATCTATATAGTGCATCCTCAAAACCTGTACGCAGGTTATCTATTCATT TACCTATACCGGACGCGAAC
Downstream 100 bases:
>100_bases ACGAAAAAAGCCCCTGCAAAGAAGAGGGGCAAGACACACAACAACACCAGGGAAATCGTTAATACTAACTTGCGGATACT ATAAGGTTTTTGCGGCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSQTPFWQQKTLAEMSEQEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKSCQCRNYERRFELEEDCIKLTREN LTTFDWLPPTCAYRLIGEGKPLFSWHPLVSGSKAAMHGERITVRHIAVRESEVVDWQDHIMNKPSWAR
Sequences:
>Translated_148_residues MSQTPFWQQKTLAEMSEQEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKSCQCRNYERRFELEEDCIKLTREN LTTFDWLPPTCAYRLIGEGKPLFSWHPLVSGSKAAMHGERITVRHIAVRESEVVDWQDHIMNKPSWAR >Mature_147_residues SQTPFWQQKTLAEMSEQEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKSCQCRNYERRFELEEDCIKLTRENL TTFDWLPPTCAYRLIGEGKPLFSWHPLVSGSKAAMHGERITVRHIAVRESEVVDWQDHIMNKPSWAR
Specific function: Unknown
COG id: COG2983
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0260 family
Homologues:
Organism=Escherichia coli, GI145693117, Length=148, Percent_Identity=81.0810810810811, Blast_Score=262, Evalue=7e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2751_SERP5 (A8GFG2)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001478980.1 - STRING: A8GFG2 - GeneID: 5607109 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_2751 - eggNOG: COG2983 - HOGENOM: HBG490440 - OMA: TCQCSDY - ProtClustDB: PRK05170 - BioCyc: SPRO399741:SPRO_2751-MONOMER - HAMAP: MF_00676 - InterPro: IPR008228 - InterPro: IPR005358 - PIRSF: PIRSF006173
Pfam domain/function: PF03692 UPF0153
EC number: NA
Molecular weight: Translated: 17322; Mature: 17191
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTPFWQQKTLAEMSEQEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKSCQC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC RNYERRFELEEDCIKLTRENLTTFDWLPPTCAYRLIGEGKPLFSWHPLVSGSKAAMHGER CCHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCHHHCCCE ITVRHIAVRESEVVDWQDHIMNKPSWAR EEEEEEECCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure SQTPFWQQKTLAEMSEQEWESLCDGCGQCCLNKLIDEDTDEIYFTNVACDQLNIKSCQC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC RNYERRFELEEDCIKLTRENLTTFDWLPPTCAYRLIGEGKPLFSWHPLVSGSKAAMHGER CCHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCHHHCCCE ITVRHIAVRESEVVDWQDHIMNKPSWAR EEEEEEECCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA