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The map label for this gene is ycgM [H]

Identifier: 157370993

GI number: 157370993

Start: 3033768

End: 3034424

Strand: Reverse

Name: ycgM [H]

Synonym: Spro_2753

Alternate gene names: 157370993

Gene position: 3034424-3033768 (Counterclockwise)

Preceding gene: 157370994

Following gene: 157370991

Centisome position: 55.69

GC content: 53.42

Gene sequence:

>657_bases
ATGTATCAACATAGAGACTGGCAGGGTTCATTACTTGATTTTCCGGTAAACAAAGTGGTTTGTGTAGGCAGTAACTACGC
CGATCATATTAAGGAAATGGGTAGTGCGACCTCGGCAGAGCCGGTAGTGTTTATCAAGCCTGAAACGGCGCTGTGCGATA
TCCGCCAGCCGGTGGCGATCCCCAAAGAGTTCGGTTCGGTACATCATGAAGTGGAACTGGCAGTGTTGATTGGCACGCCG
TTAAAACAGGCTAATGAAGATCGAGTGGCTCGGGCCATCGCCGGTTACGGTGTTGCGCTGGATTTGACGCTGCGTGAGCT
GCAGGCGGGGTTCAAGAAGGCCGGGCAGCCTTGGGAAAAAGCCAAGGGTTTTGACGGCTCCTGCCCGATCTCCGGTTTTA
TTCCGGTGGCAGAGTTTGGCGATCCGCAAAATGCCGAGCTGTCACTGACGGTCAATGACCAGGTGCGTCAGCAGGGCAAT
ACTCGCGATATGATCACCCCGATCCTGCCGCTGATCAGCTATATGAGCCGTTTCTTCACGCTGCGCGCAGGTGACATTAT
TCTTACCGGCACTCCGCAAGGCGTTGGCCCGATGAGCTCAGGCGACATGCTGAAAATCACACTCAACGGTAAATCATTAA
CGACTCGCGTGATTTAA

Upstream 100 bases:

>100_bases
ACGGTATCGGGCAATAAATTAGGGCCAGAGTACCTCCACCCGCGCGTGGGATAACGGGCTTAGCAAGCTAAGCCCCTACA
TGATTGTAGGGAGATGCGGT

Downstream 100 bases:

>100_bases
AGCCAGGCAAGACGGCACTAAAAAAGGCCCCATGGGGCCTTTTGTCGTTTCTTCGGTTAGGGGCGGGCAAAGTGCTTATT
TACGGCCCAGCAAGAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MYQHRDWQGSLLDFPVNKVVCVGSNYADHIKEMGSATSAEPVVFIKPETALCDIRQPVAIPKEFGSVHHEVELAVLIGTP
LKQANEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEKAKGFDGSCPISGFIPVAEFGDPQNAELSLTVNDQVRQQGN
TRDMITPILPLISYMSRFFTLRAGDIILTGTPQGVGPMSSGDMLKITLNGKSLTTRVI

Sequences:

>Translated_218_residues
MYQHRDWQGSLLDFPVNKVVCVGSNYADHIKEMGSATSAEPVVFIKPETALCDIRQPVAIPKEFGSVHHEVELAVLIGTP
LKQANEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEKAKGFDGSCPISGFIPVAEFGDPQNAELSLTVNDQVRQQGN
TRDMITPILPLISYMSRFFTLRAGDIILTGTPQGVGPMSSGDMLKITLNGKSLTTRVI
>Mature_218_residues
MYQHRDWQGSLLDFPVNKVVCVGSNYADHIKEMGSATSAEPVVFIKPETALCDIRQPVAIPKEFGSVHHEVELAVLIGTP
LKQANEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEKAKGFDGSCPISGFIPVAEFGDPQNAELSLTVNDQVRQQGN
TRDMITPILPLISYMSRFFTLRAGDIILTGTPQGVGPMSSGDMLKITLNGKSLTTRVI

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=202, Percent_Identity=44.0594059405941, Blast_Score=182, Evalue=2e-46,
Organism=Homo sapiens, GI215422413, Length=194, Percent_Identity=44.3298969072165, Blast_Score=181, Evalue=3e-46,
Organism=Homo sapiens, GI66348062, Length=194, Percent_Identity=44.3298969072165, Blast_Score=181, Evalue=4e-46,
Organism=Homo sapiens, GI156231349, Length=181, Percent_Identity=38.121546961326, Blast_Score=124, Evalue=7e-29,
Organism=Homo sapiens, GI40786394, Length=181, Percent_Identity=37.0165745856354, Blast_Score=119, Evalue=2e-27,
Organism=Escherichia coli, GI1787428, Length=219, Percent_Identity=73.5159817351598, Blast_Score=347, Evalue=3e-97,
Organism=Caenorhabditis elegans, GI17557057, Length=194, Percent_Identity=42.2680412371134, Blast_Score=166, Evalue=6e-42,
Organism=Saccharomyces cerevisiae, GI6324161, Length=224, Percent_Identity=33.4821428571429, Blast_Score=130, Evalue=1e-31,
Organism=Drosophila melanogaster, GI28571789, Length=188, Percent_Identity=42.0212765957447, Blast_Score=156, Evalue=9e-39,
Organism=Drosophila melanogaster, GI28572127, Length=180, Percent_Identity=32.7777777777778, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24663695, Length=192, Percent_Identity=26.0416666666667, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 23683; Mature: 23683

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQHRDWQGSLLDFPVNKVVCVGSNYADHIKEMGSATSAEPVVFIKPETALCDIRQPVAI
CCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHCCCCCCCCEEEECCCCHHHCCCCCCCC
PKEFGSVHHEVELAVLIGTPLKQANEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEK
CHHHCCCCCEEEEEEEECCCHHHCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCHHH
AKGFDGSCPISGFIPVAEFGDPQNAELSLTVNDQVRQQGNTRDMITPILPLISYMSRFFT
HCCCCCCCCCCCCEEHHHCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHE
LRAGDIILTGTPQGVGPMSSGDMLKITLNGKSLTTRVI
EECCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MYQHRDWQGSLLDFPVNKVVCVGSNYADHIKEMGSATSAEPVVFIKPETALCDIRQPVAI
CCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHCCCCCCCCEEEECCCCHHHCCCCCCCC
PKEFGSVHHEVELAVLIGTPLKQANEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEK
CHHHCCCCCEEEEEEEECCCHHHCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCHHH
AKGFDGSCPISGFIPVAEFGDPQNAELSLTVNDQVRQQGNTRDMITPILPLISYMSRFFT
HCCCCCCCCCCCCEEHHHCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHE
LRAGDIILTGTPQGVGPMSSGDMLKITLNGKSLTTRVI
EECCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10806384 [H]