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The map label for this gene is yhcF [H]

Identifier: 157370648

GI number: 157370648

Start: 2630786

End: 2631538

Strand: Reverse

Name: yhcF [H]

Synonym: Spro_2408

Alternate gene names: 157370648

Gene position: 2631538-2630786 (Counterclockwise)

Preceding gene: 157370649

Following gene: 157370647

Centisome position: 48.3

GC content: 54.71

Gene sequence:

>753_bases
ATGTGTGGAACACATATTGAAAGGAATATATCAATGAAAAAAACACTACTCGCCACCCTTTTGACCGCCGGTGCCGTTGT
TTGCGCCTCATCCGTCTTCGCTGCCGACAGCGTAGACCTCAAGGTTATCGGGACTATTACGCCGGTAGCCTGTACCCCAA
CCCTGAGCGGCGGCGGCACCGTAGACTACGGCACCATCAAGGCCGATACCCTGAAGGCGGACGATTACACCGTGCTGCCG
GTAAAATCGCTGGATTTTGCCATTACCTGTGACGGCAATGCCAAGGTCGCCGTCAATGCGTTCAGCGGGCGCATGGGCAC
TACGGTGGGCGATGCCGAAGCCACCAACGGGGCATCTACTATTCCAGCCGGGATCACGATTTTCGGCCAAGACTCATCCA
CCTCGACCGCGCAAGCCTTTGGGCTGGGGTTGGATGGCACGAAGAAAATCGGTGGGTATTTAACGCGGTTCAATAATGCA
AACGCAAAGGCTGACGGTGTGGCAGTAGACACCATCACCCGTAGGGGGCCAACGGGCACATGGCTAGCGGCAGCTCAAAA
AACTGCCAATCTTGTATCTAAAACATTTTTACAACCTTCCTGGGCTGCCACTGGCACCCTGACCCCAGTGGCGTTCAAAA
CTCTGGCCACCACTCTGGAAGTTCAGGCCTTTATCAACAAGGCCTCCGAACTGGATATCACCAAACCGATCCAGCTGGAC
GGCCTGGCTACCCTTGAACTGATCTATCTGTAA

Upstream 100 bases:

>100_bases
AAAAGTAACAGTTTGGCTCAAAATGTTACCTTTTTTCCAACGGGAAACCTGCCGAGCCAGACCAAAAGGAACAACCTTTT
CAAAGGGTTAATGGACATCC

Downstream 100 bases:

>100_bases
CCCGGCCTGAAGCCCCGTCATTGACGGGGCCTACCTACCCCCACAATCCCCTACCGGGCAGGTTACAAGGGTTGCCTGCC
CGGTCCAAGAAAGAGTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MCGTHIERNISMKKTLLATLLTAGAVVCASSVFAADSVDLKVIGTITPVACTPTLSGGGTVDYGTIKADTLKADDYTVLP
VKSLDFAITCDGNAKVAVNAFSGRMGTTVGDAEATNGASTIPAGITIFGQDSSTSTAQAFGLGLDGTKKIGGYLTRFNNA
NAKADGVAVDTITRRGPTGTWLAAAQKTANLVSKTFLQPSWAATGTLTPVAFKTLATTLEVQAFINKASELDITKPIQLD
GLATLELIYL

Sequences:

>Translated_250_residues
MCGTHIERNISMKKTLLATLLTAGAVVCASSVFAADSVDLKVIGTITPVACTPTLSGGGTVDYGTIKADTLKADDYTVLP
VKSLDFAITCDGNAKVAVNAFSGRMGTTVGDAEATNGASTIPAGITIFGQDSSTSTAQAFGLGLDGTKKIGGYLTRFNNA
NAKADGVAVDTITRRGPTGTWLAAAQKTANLVSKTFLQPSWAATGTLTPVAFKTLATTLEVQAFINKASELDITKPIQLD
GLATLELIYL
>Mature_250_residues
MCGTHIERNISMKKTLLATLLTAGAVVCASSVFAADSVDLKVIGTITPVACTPTLSGGGTVDYGTIKADTLKADDYTVLP
VKSLDFAITCDGNAKVAVNAFSGRMGTTVGDAEATNGASTIPAGITIFGQDSSTSTAQAFGLGLDGTKKIGGYLTRFNNA
NAKADGVAVDTITRRGPTGTWLAAAQKTANLVSKTFLQPSWAATGTLTPVAFKTLATTLEVQAFINKASELDITKPIQLD
GLATLELIYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli gltF [H]

Homologues:

Organism=Escherichia coli, GI1789613, Length=245, Percent_Identity=30.6122448979592, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789608, Length=258, Percent_Identity=32.5581395348837, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010546 [H]

Pfam domain/function: PF06551 DUF1120 [H]

EC number: NA

Molecular weight: Translated: 25703; Mature: 25703

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGTHIERNISMKKTLLATLLTAGAVVCASSVFAADSVDLKVIGTITPVACTPTLSGGGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEECCCCCCCCE
VDYGTIKADTLKADDYTVLPVKSLDFAITCDGNAKVAVNAFSGRMGTTVGDAEATNGAST
EEECEEEECEEECCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC
IPAGITIFGQDSSTSTAQAFGLGLDGTKKIGGYLTRFNNANAKADGVAVDTITRRGPTGT
CCCCEEEEECCCCCCCHHHEECCCCCCHHHCCEEEEECCCCCCCCCEEEEEEECCCCCCH
WLAAAQKTANLVSKTFLQPSWAATGTLTPVAFKTLATTLEVQAFINKASELDITKPIQLD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEC
GLATLELIYL
CCEEEEEEEC
>Mature Secondary Structure
MCGTHIERNISMKKTLLATLLTAGAVVCASSVFAADSVDLKVIGTITPVACTPTLSGGGT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEECCCCCCCCE
VDYGTIKADTLKADDYTVLPVKSLDFAITCDGNAKVAVNAFSGRMGTTVGDAEATNGAST
EEECEEEECEEECCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC
IPAGITIFGQDSSTSTAQAFGLGLDGTKKIGGYLTRFNNANAKADGVAVDTITRRGPTGT
CCCCEEEEECCCCCCCHHHEECCCCCCHHHCCEEEEECCCCCCCCCEEEEEEECCCCCCH
WLAAAQKTANLVSKTFLQPSWAATGTLTPVAFKTLATTLEVQAFINKASELDITKPIQLD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEC
GLATLELIYL
CCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]