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The map label for this gene is ydhM [C]

Identifier: 157370613

GI number: 157370613

Start: 2588814

End: 2589431

Strand: Direct

Name: ydhM [C]

Synonym: Spro_2373

Alternate gene names: 157370613

Gene position: 2588814-2589431 (Clockwise)

Preceding gene: 157370611

Following gene: 157370627

Centisome position: 47.51

GC content: 57.44

Gene sequence:

>618_bases
ATGAAAACGATCAAAAAACGATTAACCCGTGAGGAGAGCCAACATCAGACCAGAGAACGGCTGATTGAAACCGCTCGCCA
ATTATTTATTGTCGGCGGTTATGGCGGCACTTCGATCCGTGATATTGCCAGCGAGGCTGGCTATTCACAGGGGGCGTTCT
ATTCCAATTTCGCCTCCAAGGAGGATCTGCTGTTGCAACTGTTGCAGCGGCATATGGAAACCGAGGCGGCACAGCTCACC
CGCCTGACCCAGAGTGATATGGGCAGTCCGGAGCAGGTCGTTGCGGCGCTGGAGGCCTGGTCGGCGACCCTGAATCTGGA
GGTGGACTGGTGCATGCTGTCGATAGAGCTGCAACTGCATGCGCAGCGCAGCCCGGCCTTCGCCATCGAGTATCAAAGGG
TCTGGGATACCCATCAGGCAAAAATTGGCGTGGTGATAGCCTCGCTGTTTCAGCAGGTGGGTAAGACGCCGCCTGCGGAA
CCCCATGAGCTGGCGGCGGCATTCATGGCGATGGCGCACGGGCTGGCTTTGCAACGTACCCATGGGGGGGCTGATCCCTC
CGGCCGGTTGATTATGTTGTTTTTGCGCAGTCTGCTGTGGATGCCAACAGCAGACTGA

Upstream 100 bases:

>100_bases
AAGTTCAAGTGATATCCAAATCTAGTGGTAGAGGTTTAAAATATCAAGTGATATCTTGAATGCTTATAGAGTAGTGACAA
TCCGCGTAAAGTTGATACAG

Downstream 100 bases:

>100_bases
GCGCTCTTCACGGCACGTAAATGATCTCAAAGCTGGAGGTTTTATCGTAGTAGGGCGTCATGCCGCCATCGACGTAGAAA
ACCTGCAGGTCGTAATGATA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulatory Protein; Transcription Regulator Protein; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; Regulatory Protein; TetR Family Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKTIKKRLTREESQHQTRERLIETARQLFIVGGYGGTSIRDIASEAGYSQGAFYSNFASKEDLLLQLLQRHMETEAAQLT
RLTQSDMGSPEQVVAALEAWSATLNLEVDWCMLSIELQLHAQRSPAFAIEYQRVWDTHQAKIGVVIASLFQQVGKTPPAE
PHELAAAFMAMAHGLALQRTHGGADPSGRLIMLFLRSLLWMPTAD

Sequences:

>Translated_205_residues
MKTIKKRLTREESQHQTRERLIETARQLFIVGGYGGTSIRDIASEAGYSQGAFYSNFASKEDLLLQLLQRHMETEAAQLT
RLTQSDMGSPEQVVAALEAWSATLNLEVDWCMLSIELQLHAQRSPAFAIEYQRVWDTHQAKIGVVIASLFQQVGKTPPAE
PHELAAAFMAMAHGLALQRTHGGADPSGRLIMLFLRSLLWMPTAD
>Mature_205_residues
MKTIKKRLTREESQHQTRERLIETARQLFIVGGYGGTSIRDIASEAGYSQGAFYSNFASKEDLLLQLLQRHMETEAAQLT
RLTQSDMGSPEQVVAALEAWSATLNLEVDWCMLSIELQLHAQRSPAFAIEYQRVWDTHQAKIGVVIASLFQQVGKTPPAE
PHELAAAFMAMAHGLALQRTHGGADPSGRLIMLFLRSLLWMPTAD

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22864; Mature: 22864

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIKKRLTREESQHQTRERLIETARQLFIVGGYGGTSIRDIASEAGYSQGAFYSNFASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCHHHHCCCH
EDLLLQLLQRHMETEAAQLTRLTQSDMGSPEQVVAALEAWSATLNLEVDWCMLSIELQLH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEEEEEEEEEEEEE
AQRSPAFAIEYQRVWDTHQAKIGVVIASLFQQVGKTPPAEPHELAAAFMAMAHGLALQRT
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
HGGADPSGRLIMLFLRSLLWMPTAD
CCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTIKKRLTREESQHQTRERLIETARQLFIVGGYGGTSIRDIASEAGYSQGAFYSNFASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCCHHHHCCCH
EDLLLQLLQRHMETEAAQLTRLTQSDMGSPEQVVAALEAWSATLNLEVDWCMLSIELQLH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEEEEEEEEEEEEE
AQRSPAFAIEYQRVWDTHQAKIGVVIASLFQQVGKTPPAEPHELAAAFMAMAHGLALQRT
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
HGGADPSGRLIMLFLRSLLWMPTAD
CCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA