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The map label for this gene is ynfB [C]

Identifier: 157370528

GI number: 157370528

Start: 2492041

End: 2492409

Strand: Reverse

Name: ynfB [C]

Synonym: Spro_2288

Alternate gene names: 157370528

Gene position: 2492409-2492041 (Counterclockwise)

Preceding gene: 157370530

Following gene: 157370527

Centisome position: 45.74

GC content: 55.83

Gene sequence:

>369_bases
ATGAAAACACTTTCGACTCAACGACTGCTGCGCGGGATGCTGCCGGTCGCCATGCTGATGCTGATGGGGGCCTGGCAGGC
TCCAGCACTGGCCGCCAGCTGCACTCAGGGCAGCACCTGCGTTACCGTCGATGGCAGCAACAGCGGTGCCATGAGTACCG
AAGCGGCCCGTCAGAGCAAACAGCAGTTTAACGATACCAAATCCCTGCGCAATAAGGTTAACACCCGCGTGGAGAAAGAG
TTCGACAAGGTAGACAAGGCGATTGACAGCGAAGAGCGCTGCGATGATAGCCTGAACGTCAATGCTTACTGGGAACCAAA
CACCCGTAAATGTCTGGATCGCCAGACCGGTCGTCAGATTAATCCTTAA

Upstream 100 bases:

>100_bases
GCAGTCCGACAGCGCGATGGTATATTTATCAACACGCCTGCGGGCGCGGTAAAGCCAGTGTTGCCGTTATCAGGCAACAC
TAACTCATAAGGATGAAACG

Downstream 100 bases:

>100_bases
TCTGGTCGCAGCAAGACGGTGGCCGTTACTCTTCGCCACCGTAGCTGCTATCCTGACAAAGTAAGCCCATTTTCAAATAA
GGACGAATGGATGAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKTLSTQRLLRGMLPVAMLMLMGAWQAPALAASCTQGSTCVTVDGSNSGAMSTEAARQSKQQFNDTKSLRNKVNTRVEKE
FDKVDKAIDSEERCDDSLNVNAYWEPNTRKCLDRQTGRQINP

Sequences:

>Translated_122_residues
MKTLSTQRLLRGMLPVAMLMLMGAWQAPALAASCTQGSTCVTVDGSNSGAMSTEAARQSKQQFNDTKSLRNKVNTRVEKE
FDKVDKAIDSEERCDDSLNVNAYWEPNTRKCLDRQTGRQINP
>Mature_122_residues
MKTLSTQRLLRGMLPVAMLMLMGAWQAPALAASCTQGSTCVTVDGSNSGAMSTEAARQSKQQFNDTKSLRNKVNTRVEKE
FDKVDKAIDSEERCDDSLNVNAYWEPNTRKCLDRQTGRQINP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0482 family

Homologues:

Organism=Escherichia coli, GI1787866, Length=95, Percent_Identity=52.6315789473684, Blast_Score=98, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2288_SERP5 (A8GE49)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478517.1
- STRING:   A8GE49
- GeneID:   5604796
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2288
- eggNOG:   NOG12249
- HOGENOM:   HBG636731
- OMA:   ARQSKEQ
- ProtClustDB:   PRK13659
- BioCyc:   SPRO399741:SPRO_2288-MONOMER
- HAMAP:   MF_01581
- InterPro:   IPR009700
- ProDom:   PD073251

Pfam domain/function: PF06932 DUF1283

EC number: NA

Molecular weight: Translated: 13559; Mature: 13559

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLSTQRLLRGMLPVAMLMLMGAWQAPALAASCTQGSTCVTVDGSNSGAMSTEAARQSK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH
QQFNDTKSLRNKVNTRVEKEFDKVDKAIDSEERCDDSLNVNAYWEPNTRKCLDRQTGRQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCHHHHHHHHCCCCC
NP
CC
>Mature Secondary Structure
MKTLSTQRLLRGMLPVAMLMLMGAWQAPALAASCTQGSTCVTVDGSNSGAMSTEAARQSK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHH
QQFNDTKSLRNKVNTRVEKEFDKVDKAIDSEERCDDSLNVNAYWEPNTRKCLDRQTGRQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCHHHHHHHHCCCCC
NP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA