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The map label for this gene is ynfD [H]

Identifier: 157370527

GI number: 157370527

Start: 2491651

End: 2491950

Strand: Reverse

Name: ynfD [H]

Synonym: Spro_2287

Alternate gene names: 157370527

Gene position: 2491950-2491651 (Counterclockwise)

Preceding gene: 157370528

Following gene: 157370525

Centisome position: 45.73

GC content: 54.33

Gene sequence:

>300_bases
ATGAAAAAAGCGCTTATTCTGGGTGTACTGCTGATGGCCGCTGCGCCGTTGGCCGCCCTGGCCTCATGCGAAAGCGTGAA
GGCAGACATTTCGCAGAAAATCGTCAAAAACGGCGTGCCTGAGTCTGGTTTCAAACTGGATATCGTGCCGAACGATCAGG
CCCAACAGACCGGTGGTCTGGTAGTTGGCCACTGCGAAAATGACACGCAGAAGATTGTTTATACTCGCCTGGGCAACGGC
GATGACAATGGTGACGCGGCTCAGACCGGCACCAGTCAGGATACCAAAACCTCGCAATAG

Upstream 100 bases:

>100_bases
TAATCCTTAATCTGGTCGCAGCAAGACGGTGGCCGTTACTCTTCGCCACCGTAGCTGCTATCCTGACAAAGTAAGCCCAT
TTTCAAATAAGGACGAATGG

Downstream 100 bases:

>100_bases
TTTCCGCTCAGGGCGCTCGGTGCGCCCTTTCCTTTTTATTTAAGCCTGTTCAGCCTCTTCTCCCTCACCCTGTGGTCTGT
GCCGCGCCGGGATCAGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKKALILGVLLMAAAPLAALASCESVKADISQKIVKNGVPESGFKLDIVPNDQAQQTGGLVVGHCENDTQKIVYTRLGNG
DDNGDAAQTGTSQDTKTSQ

Sequences:

>Translated_99_residues
MKKALILGVLLMAAAPLAALASCESVKADISQKIVKNGVPESGFKLDIVPNDQAQQTGGLVVGHCENDTQKIVYTRLGNG
DDNGDAAQTGTSQDTKTSQ
>Mature_99_residues
MKKALILGVLLMAAAPLAALASCESVKADISQKIVKNGVPESGFKLDIVPNDQAQQTGGLVVGHCENDTQKIVYTRLGNG
DDNGDAAQTGTSQDTKTSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081940, Length=60, Percent_Identity=61.6666666666667, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010595
- ProDom:   PD336997 [H]

Pfam domain/function: PF06649 DUF1161 [H]

EC number: NA

Molecular weight: Translated: 10271; Mature: 10271

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALILGVLLMAAAPLAALASCESVKADISQKIVKNGVPESGFKLDIVPNDQAQQTGGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCE
VVGHCENDTQKIVYTRLGNGDDNGDAAQTGTSQDTKTSQ
EEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKALILGVLLMAAAPLAALASCESVKADISQKIVKNGVPESGFKLDIVPNDQAQQTGGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCE
VVGHCENDTQKIVYTRLGNGDDNGDAAQTGTSQDTKTSQ
EEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9868784 [H]