| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is mlc [H]
Identifier: 157370523
GI number: 157370523
Start: 2486532
End: 2487749
Strand: Direct
Name: mlc [H]
Synonym: Spro_2283
Alternate gene names: 157370523
Gene position: 2486532-2487749 (Clockwise)
Preceding gene: 157370522
Following gene: 157370524
Centisome position: 45.63
GC content: 57.39
Gene sequence:
>1218_bases GTGATTGCTGTTGGGCAGCCTGGGCATATCGATCAAATCAAGCAAACAAACGCAGGGGCAGTTTATCGGCTAATCGATCA ACTGGGCCCAATTTCGCGCATCGAACTGTCAAAACGGGCGCAGCTCGCCCCCGCCAGCATCACCAAAATCGTACGCGAAC TGCTGGAAGCCCATCTGGTTAAAGAAACCGAGTTCCAGGAAGTTGGCAGCCGTGGCCGTCCGGCGGTTGGGCTGGTGCTG GACACCGAAGCTTGGCACTACCTTTCCGCACGCATCAGCCGTGGCACCATTACGCTGGCGCTGCGCGATATCAGCAGCAA ACTGGTGGTGGAAGAGTTGTTGCCACTGGCTGCTGAACATCCCGATCCATTGTTAAAACGCATTCTTGCTGAAGTCGACC AGTTCTTTATCCGCCATCAAAGCAAGCTTGAACGCCTGACGGCGATCGCCATTACGCTGCCGGGCATGGTTGACGCGATT TCCGGCGTGGTACACCGCATGCCGTTTTACGATGTCGAGGATATGCCGTTAGGCCCGGCGCTGGAAACGCGTACCGGTCT GCCGGTTTACCTGCAGCACGACATCAACGCCTGGACCATGGCCGAAGCCTTATACGGTGCATCGCGCGGCAGCCAAAACG TGATTCAGGTGGTGATCGACCACAACGTTGGCGCTGGGGTGATCACCGGTGGCAGGGTGCTGCATGCCGGCAGCCGTAGC GTGGTGGAGATTGGCCATACTCAGGTCGATCCTTACGGCAAACGTTGTTACTGCGGCAATCACGGTTGCCTGGAAACCGT CGCCAGCATCGAGAATATGCTGGAAATTGCCCGTTCGCGCCTCGGTACATCAATGAGTTCCAGTCTGCACGGTGCACCGC TGACGGTCGAGTCGCTGTGTGATGCGGCGCTGGCGGGTGACCAGTTGGCGAAAGACATTATCCTTGGGGTAGGCCACAGC GTGGGCCGCATTCTGGCGATCATGGTTAATCTGTTCAATCCGGAAAAAATCCTGGTCGGTTCCCCGCTGAACCGCGCAGC AGAAATTCTGCATCCGGCCATTGCCTCCTGTATACGTCAGCAGTCGCTGCCGGCCTACAGTGAGCAGGTGCAGGTGGAGT CCACTCAGTTCTTCAATAAGGGCACTATGCCCGGCGCGGCACTGGTGAAAGAAGCGTTATACAACGGTTCGCTGCTGGTG CAGTTGCTGCAAGGCTAA
Upstream 100 bases:
>100_bases AAATCACATAACGAATCAAATAGTTGACGCTGTATTACAAAAGCCCCACCATAGCCGATAGTCTTTATTTAGAAGCGCGA AAAATAGTAGGAGCAGGTTT
Downstream 100 bases:
>100_bases TACCAATCAGCAATTCTTATCGTTTAACGACAAAAGGTTGAGCTACCTCAAGCCCCGTCTCCCCGGCATCCTCTAGACTT TTCCCGTTCGTCGCTTTCGC
Product: ROK family protein
Products: NA
Alternate protein names: Making large colonies protein [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MIAVGQPGHIDQIKQTNAGAVYRLIDQLGPISRIELSKRAQLAPASITKIVRELLEAHLVKETEFQEVGSRGRPAVGLVL DTEAWHYLSARISRGTITLALRDISSKLVVEELLPLAAEHPDPLLKRILAEVDQFFIRHQSKLERLTAIAITLPGMVDAI SGVVHRMPFYDVEDMPLGPALETRTGLPVYLQHDINAWTMAEALYGASRGSQNVIQVVIDHNVGAGVITGGRVLHAGSRS VVEIGHTQVDPYGKRCYCGNHGCLETVASIENMLEIARSRLGTSMSSSLHGAPLTVESLCDAALAGDQLAKDIILGVGHS VGRILAIMVNLFNPEKILVGSPLNRAAEILHPAIASCIRQQSLPAYSEQVQVESTQFFNKGTMPGAALVKEALYNGSLLV QLLQG
Sequences:
>Translated_405_residues MIAVGQPGHIDQIKQTNAGAVYRLIDQLGPISRIELSKRAQLAPASITKIVRELLEAHLVKETEFQEVGSRGRPAVGLVL DTEAWHYLSARISRGTITLALRDISSKLVVEELLPLAAEHPDPLLKRILAEVDQFFIRHQSKLERLTAIAITLPGMVDAI SGVVHRMPFYDVEDMPLGPALETRTGLPVYLQHDINAWTMAEALYGASRGSQNVIQVVIDHNVGAGVITGGRVLHAGSRS VVEIGHTQVDPYGKRCYCGNHGCLETVASIENMLEIARSRLGTSMSSSLHGAPLTVESLCDAALAGDQLAKDIILGVGHS VGRILAIMVNLFNPEKILVGSPLNRAAEILHPAIASCIRQQSLPAYSEQVQVESTQFFNKGTMPGAALVKEALYNGSLLV QLLQG >Mature_405_residues MIAVGQPGHIDQIKQTNAGAVYRLIDQLGPISRIELSKRAQLAPASITKIVRELLEAHLVKETEFQEVGSRGRPAVGLVL DTEAWHYLSARISRGTITLALRDISSKLVVEELLPLAAEHPDPLLKRILAEVDQFFIRHQSKLERLTAIAITLPGMVDAI SGVVHRMPFYDVEDMPLGPALETRTGLPVYLQHDINAWTMAEALYGASRGSQNVIQVVIDHNVGAGVITGGRVLHAGSRS VVEIGHTQVDPYGKRCYCGNHGCLETVASIENMLEIARSRLGTSMSSSLHGAPLTVESLCDAALAGDQLAKDIILGVGHS VGRILAIMVNLFNPEKILVGSPLNRAAEILHPAIASCIRQQSLPAYSEQVQVESTQFFNKGTMPGAALVKEALYNGSLLV QLLQG
Specific function: Transcriptional repressor that regulates the expression of proteins that are part of the phosphotransferase system for sugar uptake. Regulates the expression of malT [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI1787878, Length=406, Percent_Identity=75.3694581280788, Blast_Score=635, Evalue=0.0, Organism=Escherichia coli, GI1786891, Length=399, Percent_Identity=40.8521303258145, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI87082127, Length=372, Percent_Identity=23.1182795698925, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87081733, Length=278, Percent_Identity=25.5395683453237, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR011991 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: NA
Molecular weight: Translated: 43718; Mature: 43718
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVGQPGHIDQIKQTNAGAVYRLIDQLGPISRIELSKRAQLAPASITKIVRELLEAHLV CCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KETEFQEVGSRGRPAVGLVLDTEAWHYLSARISRGTITLALRDISSKLVVEELLPLAAEH CHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCCC PDPLLKRILAEVDQFFIRHQSKLERLTAIAITLPGMVDAISGVVHRMPFYDVEDMPLGPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC LETRTGLPVYLQHDINAWTMAEALYGASRGSQNVIQVVIDHNVGAGVITGGRVLHAGSRS CCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCEEEECCCCC VVEIGHTQVDPYGKRCYCGNHGCLETVASIENMLEIARSRLGTSMSSSLHGAPLTVESLC EEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHH DAALAGDQLAKDIILGVGHSVGRILAIMVNLFNPEKILVGSPLNRAAEILHPAIASCIRQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHH QSLPAYSEQVQVESTQFFNKGTMPGAALVKEALYNGSLLVQLLQG HCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MIAVGQPGHIDQIKQTNAGAVYRLIDQLGPISRIELSKRAQLAPASITKIVRELLEAHLV CCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KETEFQEVGSRGRPAVGLVLDTEAWHYLSARISRGTITLALRDISSKLVVEELLPLAAEH CHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCCC PDPLLKRILAEVDQFFIRHQSKLERLTAIAITLPGMVDAISGVVHRMPFYDVEDMPLGPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCC LETRTGLPVYLQHDINAWTMAEALYGASRGSQNVIQVVIDHNVGAGVITGGRVLHAGSRS CCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCEEEECCCCC VVEIGHTQVDPYGKRCYCGNHGCLETVASIENMLEIARSRLGTSMSSSLHGAPLTVESLC EEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHH DAALAGDQLAKDIILGVGHSVGRILAIMVNLFNPEKILVGSPLNRAAEILHPAIASCIRQ HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHH QSLPAYSEQVQVESTQFFNKGTMPGAALVKEALYNGSLLVQLLQG HCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7766024; 9097039; 9278503 [H]